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We propose a new graph-theoretic benchmark in this paper. The benchmark is developed to address shortcomings of an existing widely-used graph benchmark. We thoroughly studied a large number of traditional and contemporary graph algorithms…

Performance · Computer Science 2010-05-06 Andy B. Yoo , Yang Liu , Sheila Vaidya , Stephen Poole

We study a general class of problems called F-deletion problems. In an F-deletion problem, we are asked whether a subset of at most $k$ vertices can be deleted from a graph $G$ such that the resulting graph does not contain as a minor any…

Data Structures and Algorithms · Computer Science 2010-10-08 Fedor V. Fomin , Daniel Lokshtanov , Neeldhara Misra , Geevarghese Philip , Saket Saurabh

We consider the problem of counting the number of vertices reachable from each vertex in a digraph $G$, which is equal to computing all the out-degrees of the transitive closure of $G$. The current (theoretically) fastest algorithms run in…

Data Structures and Algorithms · Computer Science 2022-02-28 Naoto Ohsaka

In this paper we investigate the parameterized complexity of the task of counting and detecting occurrences of small patterns in unit disk graphs: Given an $n$-vertex unit disk graph $G$ with an embedding of ply $p$ (that is, the graph is…

Computational Complexity · Computer Science 2024-05-28 Jesper Nederlof , Krisztina Szilágyi

We consider the Minimum Steiner Cut problem on undirected planar graphs with non-negative edge weights. This problem involves finding the minimum cut of the graph that separates a specified subset $X$ of vertices (terminals) into two parts.…

Data Structures and Algorithms · Computer Science 2020-01-01 Stephen Jue , Philip N. Klein

Connectivity problems like k-Path and k-Disjoint Paths relate to many important milestones in parameterized complexity, namely the Graph Minors Project, color coding, and the recent development of techniques for obtaining kernelization…

Data Structures and Algorithms · Computer Science 2015-03-19 Hans L. Bodlaender , Bart M. P. Jansen , Stefan Kratsch

In the F-minor-free deletion problem we want to find a minimum vertex set in a given graph that intersects all minor models of graphs from the family F. The Vertex planarization problem is a special case of F-minor-free deletion for the…

Data Structures and Algorithms · Computer Science 2022-02-07 Bart M. P. Jansen , Michał Włodarczyk

A minimum cycle basis of a weighted undirected graph $G$ is a basis of the cycle space of $G$ such that the total weight of the cycles in this basis is minimized. If $G$ is a planar graph with non-negative edge weights, such a basis can be…

Discrete Mathematics · Computer Science 2009-12-08 Christian Wulff-Nilsen

For fixed integers $r,\ell \geq 0$, a graph $G$ is called an {\em $(r,\ell)$-graph} if the vertex set $V(G)$ can be partitioned into $r$ independent sets and $\ell$ cliques. The class of $(r, \ell)$ graphs generalizes $r$-colourable graphs…

Data Structures and Algorithms · Computer Science 2015-12-15 Sudeshna Kolay , Fahad Panolan , Venkatesh Raman , Saket Saurabh

We study the \textsc{$\alpha$-Fixed Cardinality Graph Partitioning ($\alpha$-FCGP)} problem, the generic local graph partitioning problem introduced by Bonnet et al. [Algorithmica 2015]. In this problem, we are given a graph $G$, two…

Data Structures and Algorithms · Computer Science 2023-08-31 Fedor V. Fomin , Petr A. Golovach , Tanmay Inamdar , Tomohiro Koana

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and…

Data Structures and Algorithms · Computer Science 2019-03-05 Fedor V. Fomin , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Meirav Zehavi

Graph kernel is a powerful tool measuring the similarity between graphs. Most of the existing graph kernels focused on node labels or attributes and ignored graph hierarchical structure information. In order to effectively utilize graph…

Machine Learning · Computer Science 2020-11-03 Kai Ma , Peng Wan , Daoqiang Zhang

We give an algebraic, determinant-based algorithm for the K-Cycle problem, i.e., the problem of finding a cycle through a set of specified elements. Our approach gives a simple FPT algorithm for the problem, matching the $O^*(2^{|K|})$…

Data Structures and Algorithms · Computer Science 2013-01-09 Magnus Wahlström

Deciding if a graph is a Hamilton graph, also named the Hamilton cycle problem, is important for discrete mathematics and computer science. Due to no characterization to identify Hamilton graphs effectively, there are no tractable…

Discrete Mathematics · Computer Science 2020-11-17 Heping Jiang

The three-in-a-tree problem asks for an induced tree of the input graph containing three mandatory vertices. In 2006, Chudnovsky and Seymour [Combinatorica, 2010] presented the first polynomial time algorithm for this problem, which has…

Data Structures and Algorithms · Computer Science 2020-07-10 Guilherme C. M. Gomes , Vinicius F. dos Santos , Murilo V. G. da Silva , Jayme L. Szwarcfiter

A metro-line crossing minimization problem is to draw multiple lines on an underlying graph that models stations and rail tracks so that the number of crossings of lines becomes minimum. It has several variations by adding restrictions on…

Data Structures and Algorithms · Computer Science 2013-06-18 Yoshio Okamoto , Yuichi Tatsu , Yushi Uno

Many deep learning tasks have to deal with graphs (e.g., protein structures, social networks, source code abstract syntax trees). Due to the importance of these tasks, people turned to Graph Neural Networks (GNNs) as the de facto method for…

Machine Learning · Computer Science 2021-12-07 Shunhua Jiang , Yunze Man , Zhao Song , Zheng Yu , Danyang Zhuo

Given an undirected, edge-weighted graph G together with pairs of vertices, called pairs of terminals, the minimum multicut problem asks for a minimum-weight set of edges such that, after deleting these edges, the two terminals of each pair…

Data Structures and Algorithms · Computer Science 2016-11-24 Éric Colin de Verdière

We study kernelization of classic hard graph problems when the input graphs fulfill triadic closure properties. More precisely, we consider the recently introduced parameters closure number $c$ and the weak closure number $\gamma$ [Fox et…

Data Structures and Algorithms · Computer Science 2021-03-09 Tomohiro Koana , Christian Komusiewicz , Frank Sommer

In Maximum $k$-Vertex Cover (Max $k$-VC), the input is an edge-weighted graph $G$ and an integer $k$, and the goal is to find a subset $S$ of $k$ vertices that maximizes the total weight of edges covered by $S$. Here we say that an edge is…

Data Structures and Algorithms · Computer Science 2018-10-10 Pasin Manurangsi
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