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Understanding molecular structure, dynamics, and reactivity requires bridging processes that occur across widely separated time scales. Conventional molecular dynamics simulations provide atomistic resolution, but their femtosecond time…

Chemical Physics · Physics 2025-10-10 Juan Viguera Diez , Mathias Schreiner , Simon Olsson

The replica exchange method is a powerful tool for overcoming slow relaxation in molecular simulations, but its efficiency depends strongly on the choice of the number and interval of replicas and their exchange probabilities. Here, we…

Statistical Mechanics · Physics 2025-06-04 Akie Kowaguchi , Katsuhiro Endo , Kentaro Nomura , Shuichi Kurabayashi , Paul E. Brumby , Kenji Yasuoka

Tracking a point through a video can be a challenging task due to uncertainty arising from visual obfuscations, such as appearance changes and occlusions. Although current state-of-the-art discriminative models excel in regressing long-term…

Computer Vision and Pattern Recognition · Computer Science 2025-10-27 Mattie Tesfaldet , Adam W. Harley , Konstantinos G. Derpanis , Derek Nowrouzezahrai , Christopher Pal

TAPAS is a novel adaptive sampling method for the softmax model. It uses a two pass sampling strategy where the examples used to approximate the gradient of the partition function are first sampled according to a squashed population…

Machine Learning · Computer Science 2017-07-17 Yu Bai , Sally Goldman , Li Zhang

We present a new efficient transition pathway search method based on the least action principle and the Gaussian process regression method. Most pathway search methods developed so far rely on string representations, which approximate a…

Computational Physics · Physics 2022-09-13 JaeHwan Shim , Juyong Lee , Jaejun Yu

Enabling resilient autonomous motion planning requires robust predictions of surrounding road users' future behavior. In response to this need and the associated challenges, we introduce our model titled MTP-GO. The model encodes the scene…

Robotics · Computer Science 2023-12-12 Theodor Westny , Joel Oskarsson , Björn Olofsson , Erik Frisk

Generative modeling, which learns joint probability distribution from data and generates samples according to it, is an important task in machine learning and artificial intelligence. Inspired by probabilistic interpretation of quantum…

Statistical Mechanics · Physics 2018-07-20 Zhao-Yu Han , Jun Wang , Heng Fan , Lei Wang , Pan Zhang

Quantum optimal control (QOC) provides a systematic framework for achieving high-fidelity operations in quantum systems and plays a central role in tasks such as gate synthesis, state transfer, and pulse design. Existing QOC methods broadly…

Quantum Physics · Physics 2026-04-28 Zeki Zeybek , Rick Mukherjee , Peter Schmelcher

Biological sensory systems, from \textit{E.~coli} chemotaxis to sensory neurons in \textit{C.~elegans}, achieve reliable adaptation over wide dynamic ranges despite operating in strongly noisy and overdamped regimes. Here, we present a…

Statistical Mechanics · Physics 2026-02-12 Gunn Kim

Advancements in vision-language models (VLMs) have propelled the field of computer vision, particularly in the zero-shot learning setting. Despite their promise, the effectiveness of these models often diminishes due to domain shifts in…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Elaine Sui , Xiaohan Wang , Serena Yeung-Levy

Motivated by the computational difficulties incurred by popular deep learning algorithms for the generative modeling of temporal densities, we propose a cheap alternative which requires minimal hyperparameter tuning and scales favorably to…

Machine Learning · Statistics 2023-10-13 Jonah Botvinick-Greenhouse , Yunan Yang , Romit Maulik

Efficient traffic management is crucial for maintaining urban mobility, especially in densely populated areas where congestion, accidents, and delays can lead to frustrating and expensive commutes. However, existing prediction methods face…

Machine Learning · Computer Science 2023-05-25 Xuhong Wang , Ding Wang , Liang Chen , Yilun Lin

Speculative sampling reduces the latency of autoregressive decoding for target model LLMs without sacrificing inference quality, by using a cheap draft model to suggest a candidate token and a verification criterion to accept or resample…

Machine Learning · Computer Science 2025-11-21 Rahul Krishna Thomas , Arka Pal

Recent works put much effort into tensor network structure search (TN-SS), aiming to select suitable tensor network (TN) structures, involving the TN-ranks, formats, and so on, for the decomposition or learning tasks. In this paper, we…

Machine Learning · Computer Science 2022-06-15 Chao Li , Junhua Zeng , Zerui Tao , Qibin Zhao

We study the sparsity and optimality properties of crowd navigation and find that existing techniques do not satisfy both criteria simultaneously: either they achieve optimality with a prohibitive number of samples or tractability…

Robotics · Computer Science 2017-05-11 Pete Trautman

Due to the time scale problem, rare events are not accessible by straight forward molecular dynamics. The presence of multiple reaction channels complicates the problem even further. The feasibility of the standard free energy based methods…

Statistical Mechanics · Physics 2009-11-13 Titus S. van Erp

Molecular dynamics (MD)-based path sampling algorithms are a very important class of methods used to study the energetics and kinetics of rare (bio)molecular events. They sample the highly informative but highly unlikely reactive…

Computational Physics · Physics 2025-07-08 Nitin Malapally , Marta Devodier , Giulia Rossetti , Paolo Carloni , Davide Mandelli

The ability to quantify information transmission is crucial for the analysis and design of natural and engineered systems. The information transmission rate is the fundamental measure for systems with time-varying signals, yet computing it…

Biological Physics · Physics 2025-09-26 Manuel Reinhardt , Gašper Tkačik , Pieter Rein ten Wolde

Branching processes are a class of continuous-time Markov chains (CTMCs) with ubiquitous applications. A general difficulty in statistical inference under partially observed CTMC models arises in computing transition probabilities when the…

Computation · Statistics 2015-03-10 Jason Xu , Vladimir N. Minin

This paper addresses the trajectory planning problem for automated vehicle on-ramp highway merging. To tackle this challenge, we extend our previous work on trajectory planning at unsignalized intersections using Partially Observable Markov…

Robotics · Computer Science 2024-12-11 Adam Kollarčík , Zdeněk Hanzálek
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