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The computational complexity of kernel methods has often been a major barrier for applying them to large-scale learning problems. We argue that this barrier can be effectively overcome. In particular, we develop methods to scale up kernel…

Let F be a finite set of graphs. In the F-Deletion problem, we are given an n-vertex graph G and an integer k as input, and asked whether at most k vertices can be deleted from G such that the resulting graph does not contain a graph from F…

Data Structures and Algorithms · Computer Science 2020-11-03 Fedor Fomin , Daniel Lokshtanov , Neeldhara Misra , Saket Saurabh

The Weisfeiler-Lehman graph kernels are among the most prevalent graph kernels due to their remarkable time complexity and predictive performance. Their key concept is based on an implicit comparison of neighborhood representing trees with…

Machine Learning · Computer Science 2021-01-21 Till Hendrik Schulz , Tamás Horváth , Pascal Welke , Stefan Wrobel

We present a sampling theory for a class of binary images with finite rate of innovation (FRI). Every image in our model is the restriction of $\mathds{1}_{\{p\leq0\}}$ to the image plane, where $\mathds{1}$ denotes the indicator function…

Computational Geometry · Computer Science 2016-11-03 Mitra Fatemi , Arash Amini , Martin Vetterli

Kernels on graphs have had limited options for node-level problems. To address this, we present a novel, generalized kernel for graphs with node feature data for semi-supervised learning. The kernel is derived from a regularization…

Machine Learning · Computer Science 2022-11-29 Yin-Cong Zhi , Felix L. Opolka , Yin Cheng Ng , Pietro Liò , Xiaowen Dong

A well-recognized limitation of kernel learning is the requirement to handle a kernel matrix, whose size is quadratic in the number of training examples. Many methods have been proposed to reduce this computational cost, mostly by using a…

Machine Learning · Computer Science 2014-11-06 Nicolò Cesa-Bianchi , Yishay Mansour , Ohad Shamir

We develop a new framework for generalizing approximation algorithms from the structural graph algorithm literature so that they apply to graphs somewhat close to that class (a scenario we expect is common when working with real-world…

This paper develops a novel mathematical framework for collaborative learning by means of geometrically inspired kernel machines which includes statements on the bounds of generalisation and approximation errors, and sample complexity. For…

Natural language processing often involves computations with semantic or syntactic graphs to facilitate sophisticated reasoning based on structural relationships. While convolution kernels provide a powerful tool for comparing graph…

Computation and Language · Computer Science 2018-02-13 Sahil Garg , Greg Ver Steeg , Aram Galstyan

A graph is geometric 1-planar if it admits a straight-line drawing where each edge is crossed at most once. We provide the first systematic study of the parameterized complexity of recognizing geometric 1-planar graphs. By substantially…

Computational Complexity · Computer Science 2026-02-11 Alexander Firbas

The use of machine learning techniques to improve the performance of branch-and-bound optimization algorithms is a very active area in the context of mixed integer linear problems, but little has been done for non-linear optimization. To…

Convex clustering is a well-regarded clustering method, resembling the similar centroid-based approach of Lloyd's $k$-means, without requiring a predefined cluster count. It starts with each data point as its centroid and iteratively merges…

Machine Learning · Statistics 2026-05-15 Shubhayan Pan , Kushal Bose , Debolina Paul , Saptarshi Chakraborty , Swagatam Das

Multigraph matching is a recent variant of the graph matching problem. In this framework, the optimization procedure considers several graphs and enforces the consistency of the matches along the graphs. This constraint can be formalized as…

Machine Learning · Computer Science 2022-10-12 François-Xavier Dupé , Rohit Yadav , Guillaume Auzias , S. Takerkart

Graph kernels have been successfully applied to many graph classification problems. Typically, a kernel is first designed, and then an SVM classifier is trained based on the features defined implicitly by this kernel. This two-stage…

Kernel methods provide an elegant and principled approach to nonparametric learning, but so far could hardly be used in large scale problems, since na\"ive implementations scale poorly with data size. Recent advances have shown the benefits…

Machine Learning · Computer Science 2020-11-30 Giacomo Meanti , Luigi Carratino , Lorenzo Rosasco , Alessandro Rudi

The notion of Turing kernelization investigates whether a polynomial-time algorithm can solve an NP-hard problem, when it is aided by an oracle that can be queried for the answers to bounded-size subproblems. One of the main open problems…

Data Structures and Algorithms · Computer Science 2017-07-07 Bart M. P. Jansen , Marcin Pilipczuk , Marcin Wrochna

We introduce a family of multilayer graph kernels and establish new links between graph convolutional neural networks and kernel methods. Our approach generalizes convolutional kernel networks to graph-structured data, by representing…

Machine Learning · Statistics 2020-06-30 Dexiong Chen , Laurent Jacob , Julien Mairal

Tokenization is a promising path to multi-modal models capable of jointly understanding protein sequences, structure, and function. Existing protein structure tokenizers create tokens by pooling information from local neighborhoods, an…

Machine Learning · Computer Science 2026-02-09 Rohit Dilip , Ayush Varshney , David Van Valen

In the Selective Coloring problem, we are given an integer $k$, a graph $G$, and a partition of $V(G)$ into $p$ parts, and the goal is to decide whether or not we can pick exactly one vertex of each part and obtain a $k$-colorable induced…

Data Structures and Algorithms · Computer Science 2020-12-01 Guilherme C. M. Gomes , Vinicius F. dos Santos

Nowadays, the coupling of electronic structure and machine learning techniques serves as a powerful tool to predict chemical and physical properties of a broad range of systems. With the aim of improving the accuracy of predictions, a large…