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Mantaci et al. [TCS 2007] defined the eBWT to extend the definition of the BWT to a collection of strings, however, since this introduction, it has been used more generally to describe any BWT of a collection of strings and the fundamental…

Data Structures and Algorithms · Computer Science 2021-06-22 Christina Boucher , Davide Cenzato , Zsuzsanna Lipták , Massimiliano Rossi , Marinella Sciortino

Motivated by the imminent growth of massive, highly redundant genomic databases, we study the problem of compressing a string database while simultaneously supporting fast random access, substring extraction and pattern matching to the…

Data Structures and Algorithms · Computer Science 2012-11-01 Travis Gagie , Paweł Gawrychowski , Christopher Hoobin , Simon J. Puglisi

Subgraph matching is a fundamental problem in graph analysis with a wide range of applications. However, due to its inherent NP-hardness, enumerating subgraph matches efficiently on large real-world graphs remains highly challenging. Most…

Databases · Computer Science 2026-03-11 Linglin Yang , Xunbin Su , Lei Zou , Xiangyang Gou , Yinnian Lin

Many compilers, synthesizers, and theorem provers rely on rewrite rules to simplify expressions or prove equivalences. Developing rewrite rules can be difficult: rules may be subtly incorrect, profitable rules are easy to miss, and rulesets…

Programming Languages · Computer Science 2021-08-25 Chandrakana Nandi , Max Willsey , Amy Zhu , Yisu Remy Wang , Brett Saiki , Adam Anderson , Adriana Schulz , Dan Grossman , Zachary Tatlock

Semantic text matching is a critical problem in information retrieval. Recently, deep learning techniques have been widely used in this area and obtained significant performance improvements. However, most models are black boxes and it is…

Information Retrieval · Computer Science 2021-08-17 Lijuan Chen , Yanyan Lan , Liang Pang , Jiafeng Guo , Xueqi Cheng

Many data extraction tasks of practical relevance require not only syntactic pattern matching but also semantic reasoning about the content of the underlying text. While regular expressions are very well suited for tasks that require only…

Programming Languages · Computer Science 2023-08-28 Qiaochu Chen , Arko Banerjee , Çağatay Demiralp , Greg Durrett , Isil Dillig

Programming-by-example (PBE) systems aim to alleviate the burden of programming. However, user-specified examples are often ambiguous, leaving multiple programs to satisfy the specification. Consequently, in most prior work, users have had…

Human-Computer Interaction · Computer Science 2023-08-15 Priyan Vaithilingam , Yewen Pu , Elena L. Glassman

Reverse Dictionary (RD) is the task of obtaining the most relevant word or set of words given a textual description or dictionary definition. Effective RD methods have applications in accessibility, translation or writing support systems.…

Computation and Language · Computer Science 2024-12-10 Fatemah Almeman , Luis Espinosa-Anke

This article proposes a convenient tool for decoding the output of neural networks trained by Connectionist Temporal Classification (CTC) for handwritten text recognition. We use regular expressions to describe the complex structures…

Neural and Evolutionary Computing · Computer Science 2016-03-31 Tobias Strauß , Gundram Leifert , Tobias Grüning , Roger Labahn

Indexing highly repetitive strings (i.e., strings with many repetitions) for fast queries has become a central research topic in string processing, because it has a wide variety of applications in bioinformatics and natural language…

Data Structures and Algorithms · Computer Science 2021-04-19 Takaaki Nishimoto , Yasuo Tabei

While regexp matching is a powerful mechanism for finding patterns in data streams, regexp engines in general only find matches that do not overlap. Moreover, different forms of nondeterministic exploration, where symbols read are processed…

Formal Languages and Automata Theory · Computer Science 2022-06-13 Ricardo Almeida

Exact string matching has been a fundamental problem in computer science for decades because of many practical applications. Some are related to common procedures, such as searching in files and text editors, or, more recently, to more…

Data Structures and Algorithms · Computer Science 2019-07-29 Konstantinos F. Xylogiannopoulos

As Large Language Models (LLMs) have become capable of generating long and descriptive code summaries, accurate and reliable evaluation of factual consistency has become a critical challenge. However, previous evaluation methods are…

Computation and Language · Computer Science 2026-04-14 Suyoung Bae , CheolWon Na , Jaehoon Lee , Yumin Lee , YunSeok Choi , Jee-Hyong Lee

Despite widespread use, the complexity class of modern regular expression matching was not well-understood. Previous work proved that regular expression matching with backreferences and lookarounds was PSPACE-complete, but the proof was not…

Programming Languages · Computer Science 2026-03-30 Victor Deng , Aurèle Barrière , Clément Pit-Claudel

In this paper, we describe a new type of match between a pattern and a text that aren't necessarily maximal in the query, but still contain useful matching information: locally maximal exact matches (LEMs). There are usually a large amount…

Data Structures and Algorithms · Computer Science 2025-05-22 Ahsan Sanaullah , Degui Zhi , Shaojie Zhang

Recursive calls over recursive data are useful for generating probability distributions, and probabilistic programming allows computations over these distributions to be expressed in a modular and intuitive way. Exact inference is also…

Programming Languages · Computer Science 2023-03-28 David Chiang , Colin McDonald , Chung-chieh Shan

The success of language models in code assistance has spurred the proposal of repository-level code completion as a means to enhance prediction accuracy, utilizing the context from the entire codebase. However, this amplified context can…

Software Engineering · Computer Science 2024-02-26 Ming Liang , Xiaoheng Xie , Gehao Zhang , Xunjin Zheng , Peng Di , wei jiang , Hongwei Chen , Chengpeng Wang , Gang Fan

Evaluating real-valued expressions to high precision is a key building block in computational mathematics, physics, and numerics. A typical implementation evaluates the whole expression in a uniform precision, doubling that precision until…

Numerical Analysis · Mathematics 2025-04-21 Artem Yadrov , Pavel Panchekha

Evaluating real-valued expressions to high precision is a key building block in computational mathematics, physics, and numerics. A typical implementation evaluates the whole expression in a uniform precision, doubling that precision until…

Mathematical Software · Computer Science 2025-08-13 Artem Yadrov , Pavel Panchekha

A subsequence of a word $w$ is a word $u$ such that $u = w[i_1] w[i_2] \cdots w[i_k]$, for some set of indices $1 \leq i_1 < i_2 < \dots < i_k \leq \vert w \vert$. A word $w$ is \emph{$k$-subsequence universal} over an alphabet $\Sigma$ if…

Formal Languages and Automata Theory · Computer Science 2025-03-25 Duncan Adamson , Pamela Fleischmann , Annika Huch , Tore Koß , Florin Manea
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