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Purpose: To develop an MRI technique for free-breathing 3D whole-liver quantification of water T1, water T2, proton density fat fraction (PDFF), R2*. Methods: An Eight-echo spoiled gradient echo pulse sequence with spiral readout was…

Historically, patient datasets have been used to develop and validate various reconstruction algorithms for PET/MRI and PET/CT. To enable such algorithm development, without the need for acquiring hundreds of patient exams, in this paper we…

Implicit Neural Representations (INRs) have emerged as a paradigm in knowledge representation, offering exceptional flexibility and performance across a diverse range of applications. INRs leverage multilayer perceptrons (MLPs) to model…

Computer Vision and Pattern Recognition · Computer Science 2025-02-19 Amer Essakine , Yanqi Cheng , Chun-Wun Cheng , Lipei Zhang , Zhongying Deng , Lei Zhu , Carola-Bibiane Schönlieb , Angelica I Aviles-Rivero

We introduce a modality-agnostic neural compression algorithm based on a functional view of data and parameterised as an Implicit Neural Representation (INR). Bridging the gap between latent coding and sparsity, we obtain compact latent…

Machine Learning · Statistics 2023-04-10 Jonathan Richard Schwarz , Jihoon Tack , Yee Whye Teh , Jaeho Lee , Jinwoo Shin

With the development of Deep Neural Networks (DNNs), many efforts have been made to handle medical image segmentation. Traditional methods such as nnUNet train specific segmentation models on the individual datasets. Plenty of recent…

Computer Vision and Pattern Recognition · Computer Science 2024-07-12 Xiaobao Wei , Jiajun Cao , Yizhu Jin , Ming Lu , Guangyu Wang , Shanghang Zhang

Accurate estimation of the speed-of-sound (SoS) is important for ultrasound (US) image reconstruction techniques and tissue characterization. Various approaches have been proposed to calculate SoS, ranging from tomography-inspired…

Machine Learning · Computer Science 2024-09-24 Michal Byra , Piotr Jarosik , Piotr Karwat , Ziemowit Klimonda , Marcin Lewandowski

Purpose The purpose of this study was to develop and evaluate a deep neural network (DNN) capable of generating flat-panel detector (FPD) images from digitally reconstructed radiography (DRR) images in lung cancer treatment, with the aim of…

Computer Vision and Pattern Recognition · Computer Science 2025-03-04 Chisako Hayashi , Shinichiro Mori , Yasukuni Mori , Lim Taehyeung , Hiroki Suyari , Hitoshi Ishikawa

Anatomical trees play a central role in clinical diagnosis and treatment planning. However, accurately representing anatomical trees is challenging due to their varying and complex topology and geometry. Traditional methods for representing…

Computer Vision and Pattern Recognition · Computer Science 2024-06-21 Ashish Sinha , Ghassan Hamarneh

We propose a deep learning-based approach that integrates MRI sequence parameters to improve the accuracy and generalizability of quantitative image synthesis from clinical weighted MRI. Our physics-driven neural network embeds MRI sequence…

Image and Video Processing · Electrical Eng. & Systems 2025-08-12 Lingjing Chen , Chengxiu Zhang , Yinqiao Yi , Yida Wang , Yang Song , Xu Yan , Shengfang Xu , Dalin Zhu , Mengqiu Cao , Yan Zhou , Chenglong Wang , Guang Yang

Recently Implicit Neural Representations (INRs) gained attention as a novel and effective representation for various data types. Thus far, prior work mostly focused on optimizing their reconstruction performance. This work investigates INRs…

Image and Video Processing · Electrical Eng. & Systems 2022-08-05 Yannick Strümpler , Janis Postels , Ren Yang , Luc van Gool , Federico Tombari

Differentiable rendering has been widely adopted in computer graphics as a powerful approach to inverse problems, enabling efficient gradient-based optimization by differentiating the image formation process with respect to millions of…

Applications of Implicit Neural Representations (INRs) have emerged as a promising deep learning approach for compactly representing large volumetric datasets. These models can act as surrogates for volume data, enabling efficient storage…

Machine Learning · Computer Science 2026-01-27 Shanu Saklani , Tushar M. Athawale , Nairita Pal , David Pugmire , Christopher R. Johnson , Soumya Dutta

Dynamic MRI reconstruction, one of inverse problems, has seen a surge by the use of deep learning techniques. Especially, the practical difficulty of obtaining ground truth data has led to the emergence of unsupervised learning approaches.…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Dayoung Baik , Jaejun Yoo

Deformable image registration (DIR) is a crucial tool in radiotherapy for analyzing anatomical changes and motion patterns. Current DIR implementations rely on discrete volumetric motion representation, which often leads to compromised…

Medical Physics · Physics 2025-07-22 Xia Li , Runzhao Yang , Muheng Li , Xiangtai Li , Antony J. Lomax , Joachim M. Buhmann , Ye Zhang

Implicit neural representation (INR) characterizes the attributes of a signal as a function of corresponding coordinates which emerges as a sharp weapon for solving inverse problems. However, the expressive power of INR is limited by the…

Computer Vision and Pattern Recognition · Computer Science 2023-04-04 Hao Zhu , Shaowen Xie , Zhen Liu , Fengyi Liu , Qi Zhang , You Zhou , Yi Lin , Zhan Ma , Xun Cao

Implicit neural representation (INR) characterizes the attributes of a signal as a function of corresponding coordinates which emerges as a sharp weapon for solving inverse problems. However, the capacity of INR is limited by the spectral…

Image and Video Processing · Electrical Eng. & Systems 2022-11-16 Shaowen Xie , Hao Zhu , Zhen Liu , Qi Zhang , You Zhou , Xun Cao , Zhan Ma

Implicit Neural Representations (INRs) are increasingly recognized as a versatile data modality for representing discretized signals, offering benefits such as infinite query resolution and reduced storage requirements. Existing signal…

Machine Learning · Computer Science 2025-03-26 Dhananjaya Jayasundara , Sudarshan Rajagopalan , Yasiru Ranasinghe , Trac D. Tran , Vishal M. Patel

Reconstructing high-fidelity magnetic resonance (MR) images from under-sampled k-space is a commonly used strategy to reduce scan time. The posterior sampling of diffusion models based on the real measurement data holds significant promise…

Image and Video Processing · Electrical Eng. & Systems 2024-07-04 Jiayue Chu , Chenhe Du , Xiyue Lin , Yuyao Zhang , Hongjiang Wei

Functional Magnetic Resonance Imaging (fMRI) data is a widely used kind of four-dimensional biomedical data, which requires effective compression. However, fMRI compressing poses unique challenges due to its intricate temporal dynamics, low…

Image and Video Processing · Electrical Eng. & Systems 2024-03-01 Ruoran Li , Runzhao Yang , Wenxin Xiang , Yuxiao Cheng , Tingxiong Xiao , Jinli Suo

Implicit Neural Representations (INRs) parameterize continuous signals via multilayer perceptrons (MLPs), enabling compact, resolution-independent modeling for tasks like image, audio, and 3D reconstruction. However, fitting high-resolution…

Machine Learning · Computer Science 2026-02-26 Chen Zhang , Wei Zuo , Bingyang Cheng , Yikun Wang , Wei-Bin Kou , Yik Chung WU , Ngai Wong