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Deep learning is changing many areas in molecular physics, and it has shown great potential to deliver new solutions to challenging molecular modeling problems. Along with this trend arises the increasing demand of expressive and versatile…

Machine Learning · Computer Science 2023-12-27 Jun Zhang , Yao-Kun Lei , Yaqiang Zhou , Yi Isaac Yang , Yi Qin Gao

Molecular communication is a biologically-inspired method of communication with attractive properties for microscale and nanoscale devices. In molecular communication, messages are transmitted by releasing a pattern of molecules at a…

Information Theory · Computer Science 2008-12-09 Andrew W. Eckford

Molecular communication (MC) is a promising paradigm for applications where traditional electromagnetic communications are impractical. However, decoding chemical signals, especially in multi-transmitter systems, remains a key challenge due…

Signal Processing · Electrical Eng. & Systems 2025-11-05 Vivien Walter , Dadi Bi , Daniel L. Ruiz Blanco , Yansha Deng

This paper deals with the multiplicative finite-field matrix channel, a discrete memoryless channel whose input and output are matrices (over a finite field) related by a multiplicative transfer matrix. The model considered here assumes…

Information Theory · Computer Science 2013-04-19 Roberto W. Nóbrega , Danilo Silva , Bartolomeu F. Uchôa-Filho

This work introduces the particle-intensity channel (PIC) as a model for molecular communication systems and characterizes the properties of the optimal input distribution and the capacity limits for this system. In the PIC, the transmitter…

Information Theory · Computer Science 2017-05-24 Nariman Farsad , Christopher Rose , Muriel Médard , Andrea Goldsmith

Molecular communication emerges as a promising communication paradigm for nanotechnology. However, solid mathematical foundations for information-theoretic analysis of molecular communication have not yet been built. In particular, no one…

Information Theory · Computer Science 2013-11-19 Ya-Ping Hsieh , Ping-Cheng Yeh

This paper focuses on molecular communication (MC) systems using two types of signaling molecules which may participate in a reversible bimolecular reaction in the channel. The motivation for studying these MC systems is that they can…

Information Theory · Computer Science 2019-07-25 Vahid Jamali , Nariman Farsad , Robert Schober , Andrea Goldsmith

Diffusive molecular communication (DMC) is envisioned as a promising approach to help realize healthcare applications within bounded biological environments. In this paper, a DMC system within a biological spherical environment is…

Signal Processing · Electrical Eng. & Systems 2018-11-15 Hamidreza Arjmandi , Mohammad Zoofaghari , Adam Noel

This letter introduces a multi-rate task-oriented communication (MR-ToC) framework. This framework dynamically adapts to variations in affordable data rate within the communication pipeline. It conceptualizes communication pipelines as…

Signal Processing · Electrical Eng. & Systems 2024-08-27 Anbang Zhang , Shuaishuai Guo

This paper extends the notion of information processing capacity for non-independent input signals in the context of reservoir computing (RC). The presence of input autocorrelation makes worthwhile the treatment of forecasting and filtering…

Emerging Technologies · Computer Science 2015-10-08 Lyudmila Grigoryeva , Julie Henriques , Juan-Pablo Ortega

Molecular Communication (MC) leverages the power of diffusion to transmit molecules from a transmitter to a receiver. A wide variety of modulation techniques based on molecule concentration, type, and release time have been extensively…

Emerging Technologies · Computer Science 2025-02-06 Boran A. Kilic , Ozgur B. Akan

In conventional molecular communication (MC) systems, the signaling molecules used for information transmission are stored, released, and then replenished by a transmitter (TX). However, the replenishment of signaling molecules at the TX is…

Reservoir computing (RC) represents a class of state-space models (SSMs) characterized by a fixed state transition mechanism (the reservoir) and a flexible readout layer that maps from the state space. It is a paradigm of computational…

Machine Learning · Computer Science 2025-04-17 Pradeep Singh , Ashutosh Kumar , Sutirtha Ghosh , Hrishit B P , Balasubramanian Raman

In this paper, a diffusion-based molecular communication channel between two nano-machines is considered. The effect of the amount of memory on performance is characterized, and a simple memory-limited decoder is proposed and its…

Biological Physics · Physics 2014-05-05 Reza Mosayebi , Hamidreza Arjmandi , Amin Gohari , Masoumeh Nasiri Kenari , Urbashi Mitra

High-dimensional nonlinear dynamical systems including neural networks can be utilized as a computational resource for information processing. In this sense, nonlinear wave systems are good candidate for such a computational resource. Here,…

Applied Physics · Physics 2019-07-30 Satoshi Sunada , Atsushi Uchida

A key challenge in Molecular Communications (MC) is low data transmission rates, which can be addressed by channel multiplexing techniques. One way to achieve channel multiplexing in MC is to leverage the diversity of different molecule…

Emerging Technologies · Computer Science 2023-05-03 Ahmet R. Emirdagi , M. Serkan Kopuzlu , M. Okan Araz , Murat Kuscu

The notion of synthetic molecular communication (MC) refers to the transmission of information via molecules and is largely foreseen for use within the human body, where traditional electromagnetic wave (EM)-based communication is…

Emerging Technologies · Computer Science 2025-04-16 Timo Jakumeit , Lukas Brand , Jens Kirchner , Robert Schober , Sebastian Lotter

In this paper, we consider noncoherent random linear coding networks (RLCNs) as a discrete memoryless channel (DMC) whose input and output alphabets consist of subspaces. This contrasts with previous channel models in the literature which…

Information Theory · Computer Science 2010-01-13 Bartolomeu F. Uchoa-Filho , Roberto W. Nobrega

Physical Reservoir Computing (PRC) is a recently developed variant of Neuromorphic Computing, where a pertinent physical system effectively projects information encoded in the input signal into a higher-dimensional space. While various…

Molecular communication (MC) is a bio-inspired method of transmitting information using biochemical signals, promising for novel medical, agricultural, and environmental applications at the intersection of bio-, nano-, and communication…

Emerging Technologies · Computer Science 2024-08-20 Eren Akyol , Ahmet Baha Ozturk , Iman Mokari Bolhassan , Murat Kuscu