Related papers: Clifford Group Equivariant Diffusion Models for 3D…
In this article we present a new and not fully employed geometric algebra model. With this model a generalization of the conformal model is achieved. We discuss the geometric objects that can be represented. Furthermore, we show that the…
Diffusion generative models have emerged as a powerful framework for addressing problems in structural biology and structure-based drug design. These models operate directly on 3D molecular structures. Due to the unfavorable scaling of…
We point out a somewhat mysterious appearance of $SU_c(3)$ representations, which exhibit the behaviour of three full generations of standard model particles. These representations are found in the Clifford algebra $\mathbb{C}l(6)$, arising…
The generative modeling of data on manifolds is an important task, for which diffusion models in flat spaces typically need nontrivial adaptations. This article demonstrates how a technique called `trivialization' can transfer the…
Current SMILES-based diffusion models for molecule generation typically support only unimodal constraint. They inject conditioning signals at the start of the training process and require retraining a new model from scratch whenever the…
Sampling viable 3D structures (e.g., molecules and point clouds) with SE(3)-invariance using diffusion-based models proved promising in a variety of real-world applications, wherein SE(3)-invariant properties can be naturally characterized…
Geometric algebra is a powerful framework that unifies mathematics and physics. Since its revival in the middle of the 1960s by David Hestenes, it attracts great attention and has been exploited in many fields such as physics, computer…
Training-free guidance methods for continuous data have seen an explosion of interest due to the fact that they enable foundation diffusion models to be paired with interchangable guidance models. Currently, equivalent guidance methods for…
Generative modeling within constrained sets is essential for scientific and engineering applications involving physical, geometric, or safety requirements (e.g., molecular generation, robotics). We present a unified framework for…
Real Clifford algebras play a fundamental role in the eight real Altland-Zirnbauer symmetry classes and the classification tables of topological phases. Here, we present another elegant realization of real Clifford algebras in the…
One particular approach to quantum groups (matrix pseudo groups) provides the Manin quantum plane. Assuming an appropriate set of non-commuting variables spanning linearly a representation space one is able to show that the endomorphisms on…
High-dimensional data are often assumed to lie on lower-dimensional manifolds. We study how to construct diffusion processes on this data manifold using only point cloud samples and without access to charts, projections, or other geometric…
We use our Clifford algebra technique, that is nilpotents and projectors which are binomials of the Clifford algebra objects $\gamma^a$ with the property $\{\gamma^a,\gamma^b\}_+ = 2 \eta^{ab}$, for representing quantum gates and quantum…
This paper presents a new approach for 3D shape generation, enabling direct generative modeling on a continuous implicit representation in wavelet domain. Specifically, we propose a compact wavelet representation with a pair of coarse and…
Recent 3D molecular generation methods primarily use asynchronous auto-regressive or synchronous diffusion models. While auto-regressive models build molecules sequentially, they're limited by a short horizon and a discrepancy between…
In this paper, we make the case that Clifford algebra is the natural framework for root systems and reflection groups, as well as related groups such as the conformal and modular groups: The metric that exists on these spaces can always be…
We present a generative modeling framework for atomistic systems that combines score-based diffusion for atomic positions with a novel continuous-time discrete diffusion process for atomic types. This approach enables flexible and…
We introduce a new framework for molecular graph generation with 3D molecular generative models. Our Synthetic Coordinate Embedding (SyCo) framework maps molecular graphs to Euclidean point clouds via synthetic conformer coordinates and…
Diffusion-based generative models have achieved promising results recently, but raise an array of open questions in terms of conceptual understanding, theoretical analysis, algorithm improvement and extensions to discrete, structured,…
We discuss a Clifford algebra framework for discrete symmetry groups (such as reflection, Coxeter, conformal and modular groups), leading to a surprising number of new results. Clifford algebras allow for a particularly simple description…