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Natural language processing (NLP) is a key technology to extract important patient information from clinical narratives to support healthcare applications. The rapid development of large language models (LLMs) has revolutionized many NLP…

Computation and Language · Computer Science 2025-09-08 Cheng Peng , Xinyu Dong , Mengxian Lyu , Daniel Paredes , Yaoyun Zhang , Yonghui Wu

As Large Language Models (LLMs) are increasingly integrated into healthcare to address complex inquiries, ensuring their reliability remains a critical challenge. Recent studies have highlighted that generic LLMs often struggle in clinical…

Computation and Language · Computer Science 2026-04-01 Bian Sun , Zhenjian Wang , Orvill de la Torre , Zirui Wang

Large pre-trained language models (LMs) such as GPT-3 have acquired a surprising ability to perform zero-shot learning. For example, to classify sentiment without any training examples, we can "prompt" the LM with the review and the label…

Computation and Language · Computer Science 2021-09-09 Ruiqi Zhong , Kristy Lee , Zheng Zhang , Dan Klein

Deploying language models (LMs) in customer-facing speech applications requires conversational fluency and adherence to specific stylistic guidelines. This can be challenging to achieve reliably using complex system prompts due to issues…

Machine Learning · Computer Science 2025-07-08 Ingo Marquardt , Philippe Brule

Veterinary medical records represent a large data resource for application to veterinary and One Health clinical research efforts. Use of the data is limited by interoperability challenges including inconsistent data formats and data…

Computation and Language · Computer Science 2025-08-22 Mayla R. Boguslav , Adam Kiehl , David Kott , G. Joseph Strecker , Tracy Webb , Nadia Saklou , Terri Ward , Michael Kirby

Achieving balanced alignment of large language models (LLMs) in terms of Helpfulness, Honesty, and Harmlessness (3H optimization) constitutes a cornerstone of responsible AI. Existing methods like data mixture strategies face limitations,…

Computation and Language · Computer Science 2026-02-03 Jinluan Yang , Dingnan Jin , Anke Tang , Li Shen , Didi Zhu , Zhengyu Chen , Ziyu Zhao , Daixin Wang , Qing Cui , Zhiqiang Zhang , Jun Zhou , Fei Wu , Kun Kuang

Due to the substantial number of clinicians, patients, and data collection environments involved in clinical trials, gathering data of superior quality poses a significant challenge. In clinical trials, patients are assessed based on their…

Machine Learning · Computer Science 2024-04-09 Ali Akram , Marija Stanojevic , Malikeh Ehghaghi , Jekaterina Novikova

Matching cancer patients to clinical trials is essential for advancing treatment and patient care. However, the inconsistent format of medical free text documents and complex trial eligibility criteria make this process extremely…

Since the Transformer architecture emerged, language model development has grown, driven by their promising potential. Releasing these models into production requires properly understanding their behavior, particularly in sensitive domains…

Computation and Language · Computer Science 2024-10-25 Andrea Posada , Daniel Rueckert , Felix Meissen , Philip Müller

To advance biomedical vison-language model capabilities through scaling up, fine-tuning, and instruction tuning, develop vision-language models with improved performance in handling long text, explore strategies to efficiently adopt vision…

Artificial Intelligence · Computer Science 2025-05-26 Cheng Peng , Kai Zhang , Mengxian Lyu , Hongfang Liu , Lichao Sun , Yonghui Wu

Healthcare data is a valuable resource for research, analysis, and decision-making in the medical field. However, healthcare data is often fragmented and distributed across various sources, making it challenging to combine and analyze…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-12 Mohammad Heydari , Reza Sarshar , Mohammad Ali Soltanshahi

With the increasing application of large language models (LLMs) in the medical domain, evaluating these models' performance using benchmark datasets has become crucial. This paper presents a comprehensive survey of various benchmark…

Clinical trial matching is a key process in health delivery and discovery. In practice, it is plagued by overwhelming unstructured data and unscalable manual processing. In this paper, we conduct a systematic study on scaling clinical trial…

The introduction of Large Language Models (LLMs), and the vast volume of publicly available medical data, amplified the application of NLP to the medical domain. However, LLMs are pretrained on data that are not explicitly relevant to the…

Computation and Language · Computer Science 2023-12-12 Chris Solomou

Objective: Clinical trials are essential for advancing pharmaceutical interventions, but they face a bottleneck in selecting eligible participants. Although leveraging electronic health records (EHR) for recruitment has gained popularity,…

Computation and Language · Computer Science 2026-01-15 Mojdeh Rahmanian , Seyed Mostafa Fakhrahmad , Seyedeh Zahra Mousavi

The extensive memory footprint of language model (LM) fine-tuning poses a challenge for both researchers and practitioners. LMs use an embedding matrix to represent extensive vocabularies, forming a substantial proportion of the model…

Computation and Language · Computer Science 2025-03-26 Miles Williams , Nikolaos Aletras

The rapid advancement of large language models(LLMs) has prompted significant interest in their potential applications in medical domains. This paper presents a comprehensive benchmark evaluation of 27 state-of-the-art LLMs on Chinese…

Computation and Language · Computer Science 2025-12-25 Chiung-Yi Tseng , Danyang Zhang , Tianyang Wang , Hongying Luo , Lu Chen , Junming Huang , Jibin Guan , Junfeng Hao , Junhao Song , Xinyuan Song , Ziqian Bi

Data sets obtained from linking multiple files are frequently affected by mismatch error, as a result of non-unique or noisy identifiers used during record linkage. Accounting for such mismatch error in downstream analysis performed on the…

Pre-trained Large Language Models (LLMs) often struggle on out-of-domain datasets like healthcare focused text. We explore specialized pre-training to adapt smaller LLMs to different healthcare datasets. Three methods are assessed:…

Computation and Language · Computer Science 2024-04-01 Niall Taylor , Dan Schofield , Andrey Kormilitzin , Dan W Joyce , Alejo Nevado-Holgado

Clinical document classification is essential for converting unstructured medical texts into standardised ICD-10 diagnoses, yet it faces challenges due to complex medical language, privacy constraints, and limited annotated datasets. Large…

Computation and Language · Computer Science 2026-02-03 Akram Mustafa , Usman Naseem , Mostafa Rahimi Azghadi