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The task of deducing three-dimensional molecular configurations from their two-dimensional graph representations holds paramount importance in the fields of computational chemistry and pharmaceutical development. The rapid advancement of…

Biomolecules · Quantitative Biology 2025-01-09 Bobin Yang , Jie Deng , Zhenghan Chen , Ruoxue Wu

In this paper, we propose a new numerical method for the underdamped Langevin diffusion (ULD) and present a non-asymptotic analysis of its sampling error in the 2-Wasserstein distance when the $d$-dimensional target distribution…

Machine Learning · Statistics 2025-08-25 Maximilian Scott , Dáire O'Kane , Andraž Jelinčič , James Foster

We present results from the first high-resolution hydrodynamical simulations of non-Gaussian cosmological models. We focus on the statistical properties of the transmitted Lyman-alpha flux in the high redshift intergalactic medium. Imprints…

Astrophysics · Physics 2010-03-26 M. Viel , E. Branchini , K. Dolag , M. Grossi , S. Matarrese , L. Moscardini

Diffusion models (DMs) are a class of generative machine learning methods that sample a target distribution by transforming samples of a trivial (often Gaussian) distribution using a learned stochastic differential equation. In standard…

Statistical Mechanics · Physics 2024-08-15 Luke Causer , Grant M. Rotskoff , Juan P. Garrahan

Flood prediction is critical for emergency planning and response to mitigate human and economic losses. Traditional physics-based hydrodynamic models generate high-resolution flood maps using numerical methods requiring fine-grid…

Computer Vision and Pattern Recognition · Computer Science 2025-11-19 Sun Han Neo , Sachith Seneviratne , Herath Mudiyanselage Viraj Vidura Herath , Abhishek Saha , Sanka Rasnayaka , Lucy Amanda Marshall

The quasidiffusion (QD) method, also known as the Variable Eddington Factor (VEF) method in the astrophysical community, is an established iterative method for accelerating source iterations in SN calculations. A great advantage of the QD…

Numerical Analysis · Mathematics 2024-10-14 Dean Wang

The precise fusion of computational fluid dynamic (CFD) data, wind tunnel tests data, and flight tests data in aerodynamic area is essential for obtaining comprehensive knowledge of both localized flow structures and global aerodynamic…

Machine Learning · Computer Science 2026-04-01 Qinye Zhu , Yu Xiang , Jun Zhang , Wenyong Wang

We show that the three-point skewness of concentration fluctuations is non-vanishing in free liquid diffusion, even in the limit of vanishingly small mean concentration gradients. We exploit a high-Schmidt reduction of nonlinear…

Statistical Mechanics · Physics 2026-03-12 Marco Bussoletti , Mirko Gallo , Amir Jafari , Gregory L. Eyink

Masked diffusion models (MDMs) have achieved notable progress in modeling discrete data, while their potential in molecular generation remains underexplored. In this work, we explore their potential and introduce the surprising result that…

Machine Learning · Computer Science 2025-09-29 Hyunjin Seo , Taewon Kim , Sihyun Yu , SungSoo Ahn

Generative diffusion models apply the concept of Langevin dynamics in physics to machine leaning, attracting a lot of interests from engineering, statistics and physics, but a complete picture about inherent mechanisms is still lacking. In…

Statistical Mechanics · Physics 2025-01-07 Zhendong Yu , Haiping Huang

Free-Viewpoint Video (FVV) enables immersive 3D experiences, but efficient compression of dynamic 3D representation remains a major challenge. Existing dynamic 3D Gaussian Splatting methods couple reconstruction with optimization-dependent…

Computer Vision and Pattern Recognition · Computer Science 2025-12-30 Wenkang Zhang , Yan Zhao , Qiang Wang , Zhixin Xu , Li Song , Zhengxue Cheng

Physical systems with complex unsteady dynamics, such as fluid flows, are often poorly represented by a single mean solution. For many practical applications, it is crucial to access the full distribution of possible states, from which…

Computational Physics · Physics 2025-04-07 Mario Lino , Tobias Pfaff , Nils Thuerey

Diffusion models have emerged as an expressive family of generative models rivaling GANs in sample quality and autoregressive models in likelihood scores. Standard diffusion models typically require hundreds of forward passes through the…

Machine Learning · Computer Science 2022-02-14 Daniel Watson , William Chan , Jonathan Ho , Mohammad Norouzi

Despite rapid improvements in the performance of central processing unit (CPU), the calculation cost of simulating chemically reacting flow using CFD remains infeasible in many cases. The application of the convolutional neural networks…

Machine Learning · Computer Science 2023-07-26 Joongoo Jeon , Juhyeong Lee , Sung Joong Kim

A generalized persistent random walk (GPRW) model to study anomalous particle diffusion influenced by angular heterogeneity is presented. Consider the motion of a particle is composed of many consecutive straight line segments. At the end…

Biological Physics · Physics 2021-11-30 Kejie Chen , Bogdan Epureanu

Knowledge distillation (KD) is a widely adopted technique for transferring knowledge from a high-capacity teacher model to a smaller student model by aligning their output distributions. However, existing methods often underperform in…

Computer Vision and Pattern Recognition · Computer Science 2026-03-25 Seonghak Kim

While deep learning methods have achieved strong performance in time series prediction, their black-box nature and inability to explicitly model underlying stochastic processes often limit their generalization to non-stationary data,…

Machine Learning · Computer Science 2026-02-10 Yuanpei Gao , Qi Yan , Yan Leng , Renjie Liao

The process of diffusion is the most elementary stochastic transport process. Brownian motion, the representative model of diffusion, played a important role in the advancement of scientific fields such as physics, chemistry, biology and…

Statistical Mechanics · Physics 2015-08-11 Alexandre Bovet

Molecular dynamics (MD) has long been the de facto choice for simulating complex atomistic systems from first principles. Recently deep learning models become a popular way to accelerate MD. Notwithstanding, existing models depend on…

Computational Engineering, Finance, and Science · Computer Science 2023-01-10 Fang Wu , Stan Z. Li

This paper introduces Bayesian Flow Networks (BFNs), a new class of generative model in which the parameters of a set of independent distributions are modified with Bayesian inference in the light of noisy data samples, then passed as input…

Machine Learning · Computer Science 2025-03-12 Alex Graves , Rupesh Kumar Srivastava , Timothy Atkinson , Faustino Gomez
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