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Channels with synchronization errors, exhibiting deletion and insertion errors, find practical applications in DNA storage, data reconstruction, and various other domains. Presence of insertions and deletions render the channel with memory,…

Information Theory · Computer Science 2025-12-19 Busra Tegin , Tolga M Duman

"Independent and identically distributed" errors do not accurately capture the noisy behavior of real-world data storage and information transmission technologies. Motivated by this, we study channels with input-correlated synchronization…

Information Theory · Computer Science 2026-05-14 Roni Con , João Ribeiro

We consider binary input deletion/substitution channels, which model certain types of synchronization errors encountered in practice. Specifically, we focus on the regime of small deletion and substitution probabilities, and by extending an…

Information Theory · Computer Science 2025-07-29 Mohammad Kazemi , Tolga M. Duman

The deletion channel is the simplest point-to-point communication channel that models lack of synchronization. Input bits are deleted independently with probability d, and when they are not deleted, they are not affected by the channel.…

Information Theory · Computer Science 2011-05-02 Yashodhan Kanoria , Andrea Montanari

Particularly motivated by DNA storage channels, we consider channels with synchronization errors modeled as insertions and deletions, along with substitutions. We focus on the case where the synchronization error process has memory and…

Information Theory · Computer Science 2026-04-14 Ruslan Morozov , Tolga M. Duman

Memoryless channels with synchronization errors as defined by a stochastic channel matrix allowing for symbol insertions and deletions in addition to random errors are considered. Such channels are information stable, hence their Shannon…

Information Theory · Computer Science 2011-03-01 Tolga M Duman

This paper considers a binary channel with deletions and insertions, where each input bit is transformed in one of the following ways: it is deleted with probability d, or an extra bit is added after it with probability i, or it is…

Information Theory · Computer Science 2014-02-10 Ramji Venkataramanan , Sekhar Tatikonda , Kannan Ramchandran

The deletion channel is the simplest point-to-point communication channel that models lack of synchronization. Despite significant effort, little is known about its capacity, and even less about optimal coding schemes. In this paper we…

Information Theory · Computer Science 2011-05-02 Yashodhan Kanoria , Andrea Montanari

For memoryless channels with continuous input alphabets, deterministic identification (DI) typically exhibits a linearithmic ($n\log n$) message growth. However, the exact DI capacity has long remained open due to a persistent gap between…

Information Theory · Computer Science 2026-05-07 Pau Colomer , Christian Deppe , Holger Boche , Andreas Winter

We consider a new formulation of a class of synchronization error channels and derive analytical bounds and numerical estimates for the capacity of these channels. For the binary channel with only deletions, we obtain an expression for the…

Information Theory · Computer Science 2016-11-17 Aravind R. Iyengar , Paul H. Siegel , Jack K. Wolf

The DNA storage channel is considered, in which the $M$ Deoxyribonucleic acid (DNA) molecules comprising each codeword are stored without order, sampled $N$ times with replacement, and then sequenced over a discrete memoryless channel. For…

Information Theory · Computer Science 2022-02-15 Nir Weinberger , Neri Merhav

Synchronization channels, such as the well-known deletion channel, are surprisingly harder to analyze than memoryless channels, and they are a source of many fundamental problems in information theory and theoretical computer science. One…

Information Theory · Computer Science 2019-11-11 Mahdi Cheraghchi , João Ribeiro

DNA data storage offers a high-density, long-term alternative to traditional storage systems, addressing the exponential growth of digital data. Composite DNA extends this paradigm by leveraging mixtures of nucleotides to increase storage…

Information Theory · Computer Science 2026-02-13 Busra Tegin , Tolga M Duman

The problem of mismatched decoding for discrete memoryless channels is addressed. A mismatched cognitive multiple-access channel is introduced, and an inner bound on its capacity region is derived using two alternative encoding methods:…

Information Theory · Computer Science 2013-05-03 Anelia Somekh-Baruch

Memoryless channels with deletion errors as defined by a stochastic channel matrix allowing for bit drop outs are considered in which transmitted bits are either independently deleted with probability $d$ or unchanged with probability…

Information Theory · Computer Science 2012-11-13 Mojtaba Rahmati , Tolga M. Duman

In this paper, we study achievable rates of concatenated coding schemes over a deoxyribonucleic acid (DNA) storage channel. Our channel model incorporates the main features of DNA-based data storage. First, information is stored on many,…

Information Theory · Computer Science 2020-05-04 Andreas Lenz , Lorenz Welter , Sven Puchinger

DNA storage has emerged as a promising solution for large-scale and long-term data preservation. Among various error types, insertions are the most frequent errors occurring in DNA sequences, where the inserted symbol is often identical or…

Information Theory · Computer Science 2026-04-07 Hengfeng Liu , Chunming Tang , Cuiling Fan

We develop a systematic approach, based on convex programming and real analysis, for obtaining upper bounds on the capacity of the binary deletion channel and, more generally, channels with i.i.d. insertions and deletions. Other than the…

Information Theory · Computer Science 2018-06-12 Mahdi Cheraghchi

This paper is concerned with the problem of error-free communication over the i.i.d. duplication channel which acts on a transmitted sequence $ x_1 \cdots x_n $ by inserting a random number of copies of each symbol $ x_i $ next to the…

Information Theory · Computer Science 2020-08-13 Mladen Kovačević

The past decade has seen notable advances in our understanding of structured error-correcting codes, particularly binary Reed--Muller (RM) codes. While initial breakthroughs were for erasure channels based on symmetry, extending these…

Information Theory · Computer Science 2025-04-23 Henry D. Pfister , Galen Reeves
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