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Related papers: Zebrafish Counting Using Event Stream Data

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Accurate pest population monitoring and tracking their dynamic changes are crucial for precision agriculture decision-making. A common limitation in existing vision-based automatic pest counting research is that models are typically…

Computer Vision and Pattern Recognition · Computer Science 2025-12-12 Xumin Gao , Mark Stevens , Grzegorz Cielniak

Image pattern recognition is an important area in digital image processing. An efficient pattern recognition algorithm should be able to provide correct recognition at a reduced computational time. Off late amongst the machine learning…

Computer Vision and Pattern Recognition · Computer Science 2016-12-08 Lei Shi , Rui Guo , Yuchen Ma

A fish farm is an area where fish raise and bred for food. Fish farm environments support the care and management of seafood within a controlled environment. Over the past few decades, there has been a remarkable increase in the calorie…

Computers and Society · Computer Science 2023-01-05 Pavlos Papadopoulos , William J Buchanan , Sarwar Sayeed , Nikolaos Pitropakis

Individual computations and social interactions underlying collective behavior in groups of animals are of great ethological, behavioral, and theoretical interest. While complex individual behaviors have successfully been parsed into small…

Neurons and Cognition · Quantitative Biology 2022-06-08 Roy Harpaz , Gašper Tkačik , Elad Schneidman

Existing image-based pest counting methods rely on single static images and often produce inaccurate results under occlusion. To address this issue, this paper proposes an automated pest counting method in water traps through active robotic…

Robotics · Computer Science 2026-03-10 Xumin Gao , Mark Stevens , Grzegorz Cielniak

In the field of environmental toxicology, rapid and precise assessment of the inflammatory response to pollutants in biological models is critical. This study leverages the power of deep learning to enable automated assessments of…

Biological Physics · Physics 2024-06-04 Lulu Xu , Peiwu Qin , Zhenglin Chen , Jiaqi Yang

Human enterprise often suffers from direct negative effects caused by jellyfish blooms. The investigation of a prior jellyfish monitoring system showed that it was unable to reliably perform in a cross validation setting, i.e. in new…

Computer Vision and Pattern Recognition · Computer Science 2021-03-09 Artjoms Gorpincenko , Geoffrey French , Peter Knight , Mike Challiss , Michal Mackiewicz

Zebrafish have been used as a model organism in many areas of biology, including the study of pattern formation. The mean-field survival model is a coupled ODE system describing the expected evolution of chromatophores coordinating to form…

Tissues and Organs · Quantitative Biology 2025-05-19 Robert Jencks

The epileptic mechanism is postulated as that an animal's neurons gradually diminish their inhibition function coupled with enhanced excitation when an epileptic event is approaching. Calcium imaging technique is designed to directly record…

Neurons and Cognition · Quantitative Biology 2018-03-13 Jingyi Zheng , Fushing Hsieh

Fish products account for about 16 percent of the human diet worldwide, as of 2017. The counting action is a significant component in growing and producing these products. Growers must count the fish accurately, to do so technological…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Chen Rothschild

Plankton are small drifting organisms found throughout the world's oceans and can be indicators of ocean health. One component of this plankton community is the zooplankton, which includes gelatinous animals and crustaceans (e.g. shrimp),…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Fukun Liu , Adam T. Greer , Gengchen Mai , Jin Sun

Live fish recognition is one of the most crucial elements of fisheries survey applications where vast amount of data are rapidly acquired. Different from general scenarios, challenges to underwater image recognition are posted by poor image…

Computer Vision and Pattern Recognition · Computer Science 2016-03-08 Meng-Che Chuang , Jenq-Neng Hwang , Kresimir Williams

Uses of underwater videos to assess diversity and abundance of fish are being rapidly adopted by marine biologists. Manual processing of videos for quantification by human analysts is time and labour intensive. Automatic processing of…

Computer Vision and Pattern Recognition · Computer Science 2018-07-17 Ranju Mandal , Rod M. Connolly , Thomas A. Schlacherz , Bela Stantic

Event-based cameras (EBCs) are poised to transform underwater robotics, yet the absence of labelled event-based datasets for underwater environments severely limits progress in tasks such as visual odometry and obstacle avoidance.…

Computer Vision and Pattern Recognition · Computer Science 2026-02-23 Jad Mansour , Sebastian Realpe , Hayat Rajani , Michele Grimaldi , Rafael Garcia , Nuno Gracias

An inverse procedure is developed and tested to recover functional and structural information from global signals of brains activity. The method assumes a leaky-integrate and fire model with excitatory and inhibitory neurons, coupled via a…

Larval zebrafish exhibit a variety of complex undulatory swimming patterns. This repertoire is controlled by the 300 neurons projecting from brain into spinal cord. Understanding how descending control signals shape the output of spinal…

Neurons and Cognition · Quantitative Biology 2007-05-23 Scott A. Hill , Xiao-Ping Liu , Melissa A. Borla , Jorge V. Jose , Donald M. O'Malley

We present zephyr, a novel method that integrates cutting-edge normalizing flow techniques into a mixture density estimation framework, enabling the effective use of heterogeneous training data for photometric redshift inference. Compared…

Instrumentation and Methods for Astrophysics · Physics 2023-11-01 Zechang Sun , Joshua S. Speagle , Song Huang , Yuan-Sen Ting , Zheng Cai

Spatial patterns arising from the collective behavior of individual agents are present across biological systems. While agent-based models offer a natural framework for uncovering unknown agent (e.g., cell) interactions, these stochastic…

Quantitative Methods · Quantitative Biology 2026-05-19 Yue Liu , Alexandria Volkening

Quantifying fish community structure is essential for understanding biodiversity and ecosystem responses in a changing environment, yet existing survey methods provide limited high-frequency, quantitative observations. Conventional…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Kota Ishikawa , Takuma Masui , Keita Koeda , Rickdane Gomez , Lucas Yutaka Kimura , Michio Kondoh

This paper proposes the use of an event camera as a component of a vision system that enables counting of fast-moving objects - in this case, falling corn grains. These type of cameras transmit information about the change in brightness of…

Computer Vision and Pattern Recognition · Computer Science 2023-11-14 Kamil Bialik , Marcin Kowalczyk , Krzysztof Blachut , Tomasz Kryjak