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Optimal transport is widely used in pure and applied mathematics to find probabilistic solutions to hard combinatorial matching problems. We extend the Wasserstein metric and other elements of optimal transport from the matching of sets to…

Optimization and Control · Mathematics 2019-07-16 Evan Patterson

Spatial transcriptomics (ST) profiles gene expression across a tissue section while preserving the spatial coordinates. Because current ST technologies typically profile two-dimensional tissue slices, integrating and aligning slices from…

Quantitative Methods · Quantitative Biology 2026-03-20 Yaqi Wu , Jingfeng Wang , Xin Maizie Zhou , Yanxiang Zhao , Zixuan Cang

The Hausdorff distance is a relatively new measure of similarity of graphs. The notion of the Hausdorff distance considers a special kind of a common subgraph of the compared graphs and depends on the structural properties outside of the…

Combinatorics · Mathematics 2023-06-22 Aleksander Kelenc

Using integral transforms to the end of lines detection in images with complex background, makes the detection a hard task needing additional processing to manage the detection. As an integral transform, the Scale Space Radon Transform…

Computer Vision and Pattern Recognition · Computer Science 2023-11-16 Aicha Baya Goumeidane , Djemel Ziou , Nafaa Nacereddine

Gradient descent, and coordinate descent in particular, are core tools in machine learning and elsewhere. Large problem instances are common. To help solve them, two orthogonal approaches are known: acceleration and parallelism. In this…

Optimization and Control · Mathematics 2018-08-16 Richard Cole , Yixin Tao

The calculation of a segment of eigenvalues and their corresponding eigenvectors of a Hermitian matrix or matrix pencil has many applications. A new density-matrix-based algorithm has been proposed recently and a software package FEAST has…

Numerical Analysis · Mathematics 2014-01-21 Ping Tak Peter Tang , Eric Polizzi

The MNIST dataset of the handwritten digits is known as one of the commonly used datasets for machine learning and computer vision research. We aim to study a widely applicable classification problem and apply a simple yet efficient…

Computer Vision and Pattern Recognition · Computer Science 2019-03-13 Divas Grover , Behrad Toghi

Iterative algorithms based on thresholding, feedback and null space tuning (NST+HT+FB) for sparse signal recovery are exceedingly effective and fast, particularly for large scale problems. The core algorithm is shown to converge in finitely…

Numerical Analysis · Mathematics 2017-11-08 Ningning Han , Shidong Li , Zhanjie Song , Hong Wang

Real-time feedback-driven single-particle tracking (RT-FD-SPT) is a class of techniques in the field of single-particle tracking that uses feedback control to keep a particle of interest in a detection volume. These methods provide high…

Chemical Physics · Physics 2022-09-29 Bertus van Heerden , Nicholas A. Vickers , Tjaart P. J. Krüger , Sean B. Andersson

Deep learning has shown great potential in accelerating diffusion tensor imaging (DTI). Nevertheless, existing methods tend to suffer from Rician noise and detail loss in reconstructing the DTI-derived parametric maps especially when…

Computer Vision and Pattern Recognition · Computer Science 2024-01-04 Wenxin Fan , Jian Cheng , Cheng Li , Xinrui Ma , Jing Yang , Juan Zou , Ruoyou Wu , Qiegen Liu , Shanshan Wang

In large scale machine learning and data mining problems with high feature dimensionality, the Euclidean distance between data points can be uninformative, and Distance Metric Learning (DML) is often desired to learn a proper similarity…

Machine Learning · Computer Science 2014-12-19 Pengtao Xie , Eric Xing

Minimum distance estimation methodology based on an empirical distribution function has been popular due to its desirable properties including robustness. Even though the statistical literature is awash with the research on the minimum…

Computation · Statistics 2023-03-30 Jiwoong Kim

Recent advances in large-margin classification of data residing in general metric spaces (rather than Hilbert spaces) enable classification under various natural metrics, such as string edit and earthmover distance. A general framework…

Machine Learning · Computer Science 2014-07-14 Lee-Ad Gottlieb , Aryeh Kontorovich , Robert Krauthgamer

Approximate K nearest neighbor (AKNN) search is a fundamental and challenging problem. We observe that in high-dimensional space, the time consumption of nearly all AKNN algorithms is dominated by that of the distance comparison operations…

Data Structures and Algorithms · Computer Science 2023-03-20 Jianyang Gao , Cheng Long

The proliferation of large data sets and Bayesian inference techniques motivates demand for better data sparsification. Coresets provide a principled way of summarizing a large dataset via a smaller one that is guaranteed to match the…

Machine Learning · Statistics 2020-03-04 Sebastian Claici , Aude Genevay , Justin Solomon

We present a novel, practical, and provable approach for solving diagonally constrained semi-definite programming (SDP) problems at scale using accelerated non-convex programming. Our algorithm non-trivially combines acceleration motions…

Optimization and Control · Mathematics 2023-02-07 Junhyung Lyle Kim , JA Lara Benitez , Mohammad Taha Toghani , Cameron Wolfe , Zhiwei Zhang , Anastasios Kyrillidis

Human identification at a distance (HID) is challenging because traditional biometric modalities such as face and fingerprints are often difficult to acquire in real-world scenarios. Gait recognition provides a practical alternative, as it…

Objects with complex structures pose significant challenges to existing instance segmentation methods that rely on boundary or affinity maps, which are vulnerable to small errors around contacting pixels that cause noticeable connectivity…

Computer Vision and Pattern Recognition · Computer Science 2023-10-10 Zudi Lin , Donglai Wei , Aarush Gupta , Xingyu Liu , Deqing Sun , Hanspeter Pfister

We introduce LOT Wassmap, a computationally feasible algorithm to uncover low-dimensional structures in the Wasserstein space. The algorithm is motivated by the observation that many datasets are naturally interpreted as probability…

Machine Learning · Computer Science 2023-02-16 Alexander Cloninger , Keaton Hamm , Varun Khurana , Caroline Moosmüller

Nearest neighbor searching of large databases in high-dimensional spaces is inherently difficult due to the curse of dimensionality. A flavor of approximation is, therefore, necessary to practically solve the problem of nearest neighbor…

Databases · Computer Science 2018-04-24 Akhil Arora , Sakshi Sinha , Piyush Kumar , Arnab Bhattacharya
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