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In this work we investigate the effect of density dependent nonlinear diffusion on pattern formation in the Brusselator system. Through linear stability analysis of the basic solution we determine the Turing and the oscillatory instability…

Mathematical Physics · Physics 2015-06-17 G. Gambino , M. C. Lombardo , M. Sammartino , V. Sciacca

Molluscan shells come in various shapes and sizes. Despite this diversity, each species produces a shell with a characteristic shape that is independent of environmental conditions. We seek to understand this robust complexity. We are…

Quantitative Methods · Quantitative Biology 2026-04-27 Huan Liu , Kaushik Bhattacharya

We investigate the kinetics of constant-kernel aggregation which is augmented by either: (a) evaporation of monomers from finite-mass clusters, or (b) continuous cluster growth -- \ie, condensation. The rate equations for these two…

Condensed Matter · Physics 2009-10-28 Paul. L. Krapivsky , Sidney Redner

The fundamental processes of biological development are governed by multiple signaling molecules that create non-uniform concentration profiles known as morphogen gradients. It is widely believed that the establishment of morphogen…

Biological Physics · Physics 2015-06-18 Hamid Teimouri , Anatoly B. Kolomeisky

We derive an upscaled model describing the aggregation and deposition of colloidal particles within a porous medium allowing for the possibility of local clogging of the pores. At the level of the pore scale, we extend an existing model for…

Analysis of PDEs · Mathematics 2019-11-19 Adrian Muntean , Christos V. Nikolopoulos

We study the spreading of a bacterial colony undergoing turbulent like collective motion. We present two minimalistic models to investigate the interplay between population growth and coherent structures arising from turbulence. Using…

Fluid Dynamics · Physics 2017-04-06 Rayan Chatterjee , Abhijeet A. Joshi , Prasad Perlekar

Magnetic skyrmions are intriguing topological spin textures that promise future high-density spintronic devices. The creation of magnetic skyrmions has been understood based on the energetics of skyrmions, but the detailed dynamic process…

Mesoscale and Nanoscale Physics · Physics 2020-11-17 Soong-Geun Je

Grain boundaries in extremely confined colloidal smectics possess a topological fine structure with coexisting nematic and tetratic symmetry of the director field. An alternative way to approach the problem of smectic topology is via the…

Soft Condensed Matter · Physics 2024-04-24 René Wittmann

We show that the short-scale elastic distortions that are excited in the vicinity of the joint between different lipidic membrane domains (at a scale of \~10 nm) may produce a "crease" from the point of view of the standard elastic…

Soft Condensed Matter · Physics 2007-05-23 Jean-Baptiste Fournier , Martine Ben Amar

(Abridged) To understand if the morphology-density and passive-density relations are already established at z>1.5, we study galaxies in 16 confirmed clusters at $1.3<z<2.8$ from the CARLA survey. Our main finding is that the…

Cellular self-assembly and organization are fundamental steps for the development of biological tissues. In this paper, within the framework of a cellular automata model, we address how an ordered tissue pattern spontaneously emerges from a…

Biological Physics · Physics 2019-10-24 Debangana Mukhopadhyay , Rumi De

Brain networks exhibit remarkable structural properties, including high local clustering, short path lengths, and heavy-tailed weight and degree distributions. While these features are thought to enable efficient information processing with…

Biological Physics · Physics 2026-01-09 Aitor Morales-Gregorio , Anno C. Kurth , Karolína Korvasová

The formation of microdomains, also called rafts, in biomembranes can be attributed to the surface tension of the membrane. In order to model this phenomenon, a model involving a coupling between the local composition and the local…

Analysis of PDEs · Mathematics 2016-06-29 Irene Fonseca , Gurgen Hayrapetyan , Giovanni Leoni , Barbara Zwicknagl

Capillary rise plays a crucial role in the construction of road embankments in flood zones, where hydrophobic compounds are added to the soil to suppress the rising of water and avoid possible damage of the pavement. Water rises through…

Computational Physics · Physics 2017-08-02 M. A. Cárdenas-Barrantes , J. D. Muñoz , N. A. M. Araujo

We study the effect of spatial structure, genetic drift, mutation, and selective pressure on the evolutionary dynamics in a simplified model of asexual organisms colonizing a new territory. Under an appropriate coarse-graining, the…

Statistical Mechanics · Physics 2013-01-15 Maxim O. Lavrentovich , Kirill S. Korolev , David R. Nelson

Many animals have patterned fur, feathers, or scales, such as the stripes of a zebra. Turing models, or reaction-diffusion systems, are a class of mathematical models of interacting species that have been successfully used to generate…

Biological Physics · Physics 2023-12-04 Michael F. Staddon

We consider a Markov evolution of lozenge tilings of a quarter-plane and study its asymptotics at large times. One of the boundary rays serves as a reflecting wall. We observe frozen and liquid regions, prove convergence of the local…

Representation Theory · Mathematics 2011-03-08 Alexei Borodin , Jeffrey Kuan

We highlight how the mass-radius relation of cluster-forming cores combined with an external tidal field can influence infant weight-loss and disruption likelihood of clusters after gas expulsion. Specifically, we study how the relation…

Astrophysics of Galaxies · Physics 2015-05-20 Genevieve Parmentier , Pavel Kroupa

Kidney branching morphogenesis has been studied extensively, but the mechanism that defines the branch points is still elusive. Here we obtained a 2D movie of kidney branching morphogenesis in culture to test different models of branching…

Tissues and Organs · Quantitative Biology 2013-07-02 Srivathsan Adivarahan , Denis Menshykau , Odysse Michos , Dagmar Iber

We consider a model of aggregation, both diffusion-limited and ballistic, based on the Cayley tree. Growth is from the leaves of the tree towards the root, leading to non-trivial screening and branch competition effects. The model exhibits…

Soft Condensed Matter · Physics 2009-10-31 M. B. Hastings , Thomas C. Halsey
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