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Related papers: Plain Transformers Can be Powerful Graph Learners

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Graph Transformer (GT) has recently emerged as a promising neural network architecture for learning graph-structured data. However, its global attention mechanism with quadratic complexity concerning the graph scale prevents wider…

Machine Learning · Computer Science 2024-12-09 Ningyi Liao , Zihao Yu , Siqiang Luo

Transformer has been popular in recent crowd counting work since it breaks the limited receptive field of traditional CNNs. However, since crowd images always contain a large number of similar patches, the self-attention mechanism in…

Computer Vision and Pattern Recognition · Computer Science 2024-01-09 Hui Lin , Zhiheng Ma , Xiaopeng Hong , Qinnan Shangguan , Deyu Meng

Designing accurate deep learning models for molecular property prediction plays an increasingly essential role in drug and material discovery. Recently, due to the scarcity of labeled molecules, self-supervised learning methods for learning…

Biomolecules · Quantitative Biology 2022-06-08 Han Li , Dan Zhao , Jianyang Zeng

Graph neural networks (GNNs) have limited expressive power, failing to represent many graph classes correctly. While more expressive graph representation learning (GRL) alternatives can distinguish some of these classes, they are…

Machine Learning · Computer Science 2021-12-08 Leonardo Cotta , Christopher Morris , Bruno Ribeiro

Spectral Graph Neural Networks have demonstrated superior performance in graph representation learning. However, many current methods focus on employing shared polynomial coefficients for all nodes, i.e., learning node-unified filters,…

Machine Learning · Computer Science 2024-07-22 Jiahong Ma , Mingguo He , Zhewei Wei

The dominant sequence transduction models are based on complex recurrent or convolutional neural networks in an encoder-decoder configuration. The best performing models also connect the encoder and decoder through an attention mechanism.…

Computation and Language · Computer Science 2023-08-03 Ashish Vaswani , Noam Shazeer , Niki Parmar , Jakob Uszkoreit , Llion Jones , Aidan N. Gomez , Lukasz Kaiser , Illia Polosukhin

Can we model Non-Euclidean graphs as pure language or even Euclidean vectors while retaining their inherent information? The Non-Euclidean property have posed a long term challenge in graph modeling. Despite recent graph neural networks and…

Machine Learning · Computer Science 2024-05-30 Zhangyang Gao , Daize Dong , Cheng Tan , Jun Xia , Bozhen Hu , Stan Z. Li

Task-conditional architecture offers advantage in parameter efficiency but falls short in performance compared to state-of-the-art multi-decoder methods. How to trade off performance and model parameters is an important and difficult…

Computer Vision and Pattern Recognition · Computer Science 2023-07-31 Yuxiang Lu , Shalayiding Sirejiding , Yue Ding , Chunlin Wang , Hongtao Lu

Graphs are widely used to model relational data. As graphs are getting larger and larger in real-world scenarios, there is a trend to store and compute subgraphs in multiple local systems. For example, recently proposed \emph{subgraph…

Machine Learning · Computer Science 2024-01-30 Zaixi Zhang , Qingyong Hu , Yang Yu , Weibo Gao , Qi Liu

While it is crucial to capture global information for effective image restoration (IR), integrating such cues into transformer-based methods becomes computationally expensive, especially with high input resolution. Furthermore, the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-07 Bin Ren , Yawei Li , Jingyun Liang , Rakesh Ranjan , Mengyuan Liu , Rita Cucchiara , Luc Van Gool , Nicu Sebe

The representation learning on textual graph is to generate low-dimensional embeddings for the nodes based on the individual textual features and the neighbourhood information. Recent breakthroughs on pretrained language models and graph…

Computation and Language · Computer Science 2023-10-10 Junhan Yang , Zheng Liu , Shitao Xiao , Chaozhuo Li , Defu Lian , Sanjay Agrawal , Amit Singh , Guangzhong Sun , Xing Xie

Knowledge graph reasoning plays a vital role in various applications and has garnered considerable attention. Recently, path-based methods have achieved impressive performance. However, they may face limitations stemming from constraints in…

Artificial Intelligence · Computer Science 2024-12-18 Junnan Liu , Qianren Mao , Weifeng Jiang , Jianxin Li

Graph Transformers (GTs) have recently emerged as popular alternatives to traditional message-passing Graph Neural Networks (GNNs), due to their theoretically superior expressiveness and impressive performance reported on standard node…

Machine Learning · Computer Science 2024-10-29 Yuankai Luo , Lei Shi , Xiao-Ming Wu

Despite much research, Graph Neural Networks (GNNs) still do not display the favorable scaling properties of other deep neural networks such as Convolutional Neural Networks and Transformers. Previous work has identified issues such as…

Machine Learning · Computer Science 2023-12-19 Ameen Ali , Hakan Cevikalp , Lior Wolf

Interpretable graph neural networks (XGNNs ) are widely adopted in various scientific applications involving graph-structured data. Existing XGNNs predominantly adopt the attention-based mechanism to learn edge or node importance for…

Machine Learning · Computer Science 2024-06-13 Yongqiang Chen , Yatao Bian , Bo Han , James Cheng

This paper presents a novel transformer architecture for graph representation learning. The core insight of our method is to fully consider the information propagation among nodes and edges in a graph when building the attention module in…

Machine Learning · Computer Science 2024-10-10 Zhe Chen , Hao Tan , Tao Wang , Tianrun Shen , Tong Lu , Qiuying Peng , Cheng Cheng , Yue Qi

Heterogeneous graph learning aims to capture complex relationships and diverse relational semantics among entities in a heterogeneous graph to obtain meaningful representations for nodes and edges. Recent advancements in heterogeneous graph…

Computation and Language · Computer Science 2024-05-21 Jiabin Tang , Yuhao Yang , Wei Wei , Lei Shi , Long Xia , Dawei Yin , Chao Huang

Transformers have achieved remarkable performance in a myriad of fields including natural language processing and computer vision. However, when it comes to the graph mining area, where graph neural network (GNN) has been the dominant…

Machine Learning · Computer Science 2021-10-26 Jianan Zhao , Chaozhuo Li , Qianlong Wen , Yiqi Wang , Yuming Liu , Hao Sun , Xing Xie , Yanfang Ye

The Transformer architecture has inarguably revolutionized deep learning, overtaking classical architectures like multi-layer perceptrons (MLPs) and convolutional neural networks (CNNs). At its core, the attention block differs in form and…

Machine Learning · Computer Science 2025-03-18 Weronika Ormaniec , Felix Dangel , Sidak Pal Singh

We propose Scalable Message Passing Neural Networks (SMPNNs) and demonstrate that, by integrating standard convolutional message passing into a Pre-Layer Normalization Transformer-style block instead of attention, we can produce…

Machine Learning · Computer Science 2026-03-11 Haitz Sáez de Ocáriz Borde , Artem Lukoianov , Anastasis Kratsios , Michael Bronstein , Xiaowen Dong