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Machine learning is driving development across many fields in science and engineering. A simple and efficient programming language could accelerate applications of machine learning in various fields. Currently, the programming languages…

Machine Learning · Computer Science 2020-05-19 Kaifeng Gao , Gang Mei , Francesco Piccialli , Salvatore Cuomo , Jingzhi Tu , Zenan Huo

Increasing emphasis on data and quantitative methods in the biomedical sciences is making biological research more computational. Collecting, curating, processing, and analysing large genomic and imaging data sets poses major computational…

Quantitative Methods · Quantitative Biology 2021-09-22 Elisabeth Roesch , Joe G. Greener , Adam L. MacLean , Huda Nassar , Christopher Rackauckas , Timothy E. Holy , Michael P. H. Stumpf

This paper proposes integrating Aspect-oriented Programming (AOP) into Julia, a language widely used in scientific and High-Performance Computing (HPC). AOP enhances software modularity by encapsulating cross-cutting concerns, such as…

Programming Languages · Computer Science 2024-12-30 Osamu Ishimura , Yoshihide Yoshimoto

The state of numerical computing is currently characterized by a divide between highly efficient yet typically cumbersome low-level languages such as C, C++, and Fortran and highly expressive yet typically slow high-level languages such as…

Optimization and Control · Mathematics 2015-03-20 Miles Lubin , Iain Dunning

The importance of computers is continually increasing in radiotherapy. Efficient algorithms, implementations and the ability to leverage advancements in computer science are crucial to improve cancer care even further and deliver the best…

Medical Physics · Physics 2024-07-08 Renato Bellotti , Antony J. Lomax , Andreas Adelmann , Jan Hrbacek

AcceleratedKernels.jl is introduced as a backend-agnostic library for parallel computing in Julia, natively targeting NVIDIA, AMD, Intel, and Apple accelerators via a unique transpilation architecture. Written in a unified, compact…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-23 Andrei-Leonard Nicusan , Dominik Werner , Simon Branford , Simon Hartley , Andrew J. Morris , Kit Windows-Yule

There are plenty of excellent plotting libraries. Each excels at a different use case: one is good for printed 2D publication figures, the other at interactive 3D graphics, a third has excellent L A TEX integration or is good for creating…

The evergrowing computational complexity of High Performance Computing applications is often met with an horizontal scalling of computing systems. Colaterally, each added node risks being a single point of failure to parallel programs,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-04 Marcos Irigoyen , Carla Santana , Ramon C. F Araújo , Samuel Xavier-de-Souza

We evaluate Julia as a single language and ecosystem paradigm powered by LLVM to develop workflow components for high-performance computing. We run a Gray-Scott, 2-variable diffusion-reaction application using a memory-bound, 7-point…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-29 William F. Godoy , Pedro Valero-Lara , Caira Anderson , Katrina W. Lee , Ana Gainaru , Rafael Ferreira da Silva , Jeffrey S. Vetter

We present a Julia-based interface to the precompiled HALLaR and cuHALLaR binaries for large-scale semidefinite programs (SDPs). Both solvers are established as fast and numerically stable, and accept problem data in formats compatible with…

Optimization and Control · Mathematics 2025-08-25 Jacob Aguirre , Diego Cifuentes , Vincent Guigues , Renato D. C. Monteiro , Victor Hugo Nascimento , Arnesh Sujanani

With the push towards Exascale computing and data-driven methods, problem sizes have increased dramatically, increasing the computational requirements of the underlying algorithms. This has led to a push to offload computations to general…

Software Engineering · Computer Science 2025-12-18 Benedict Short , Ian McInerney , John Wickerson

NetworkDynamics.jl is an easy-to-use and computationally efficient package for working with heterogeneous dynamical systems on complex networks, written in Julia, a high-level, high-performance, dynamic programming language. By combining…

Mathematical Software · Computer Science 2021-07-02 Michael Lindner , Lucas Lincoln , Fenja Drauschke , Julia Monika Koulen , Hans Würfel , Anton Plietzsch , Frank Hellmann

Like many groups considering the new programming language Julia, we faced the challenge of accessing the algorithms that we develop in Julia from R. Therefore, we developed the R package JuliaConnectoR, available from the CRAN repository…

Mathematical Software · Computer Science 2021-03-31 Stefan Lenz , Maren Hackenberg , Harald Binder

MLJ (Machine Learing in Julia) is an open source software package providing a common interface for interacting with machine learning models written in Julia and other languages. It provides tools and meta-algorithms for selecting, tuning,…

Machine Learning · Computer Science 2020-12-01 Anthony D. Blaom , Franz Kiraly , Thibaut Lienart , Yiannis Simillides , Diego Arenas , Sebastian J. Vollmer

The julia package integrates the Julia programming language into Stata. Users can transfer data between Stata and Julia, issue Julia commands to analyze and plot, and pass results back to Stata. Julia's econometric ecosystem is not as…

Econometrics · Economics 2025-05-05 David Roodman

We introduce the third major version of Metatheory.jl, a Julia library for general-purpose metaprogramming and symbolic computation. Metatheory.jl provides a flexible and performant implementation of e-graphs and Equality Saturation (EqSat)…

Programming Languages · Computer Science 2024-06-04 Alessandro Cheli , Niklas Heim

Compilers are indispensable for transforming code written in high-level languages into performant machine code, but their general-purpose optimizations sometimes fall short. Domain experts might be aware of certain optimizations that the…

Programming Languages · Computer Science 2025-07-15 Jules Merckx , Tim Besard , Bjorn De Sutter

We present Trixi.jl, a Julia package for adaptive high-order numerical simulations of hyperbolic partial differential equations. Utilizing Julia's strengths, Trixi.jl is extensible, easy to use, and fast. We describe the main design choices…

Mathematical Software · Computer Science 2022-01-19 Hendrik Ranocha , Michael Schlottke-Lakemper , Andrew R. Winters , Erik Faulhaber , Jesse Chan , Gregor J. Gassner

Driven by increasing compute requirements for deep learning models, compiler developers have been looking for ways to target specialised hardware and heterogeneous systems more efficiently. The MLIR project has the goal to offer…

Programming Languages · Computer Science 2025-03-10 Jules Merckx

As astronomical data grows in volume and complexity, the scalability of analysis software becomes increasingly important. At the same time, astrophysics analysis software relies heavily on open-source contributions, so languages and tools…

Instrumentation and Methods for Astrophysics · Physics 2024-02-01 Edward Berman , Jacqueline McCleary