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Structure identification in cosmological simulations plays an important role in analysing simulation outputs. The definition of these structures directly impacts the inferred properties derived from these simulations. This paper proposes a…

Astrophysics of Galaxies · Physics 2025-01-16 Robel Geda , Romain Teyssier

Recent success in training deep neural networks have prompted active investigation into the features learned on their intermediate layers. Such research is difficult because it requires making sense of non-linear computations performed by…

Machine Learning · Computer Science 2016-03-01 Yixuan Li , Jason Yosinski , Jeff Clune , Hod Lipson , John Hopcroft

Graph neural networks trained to predict observable dynamics can be used to decompose the temporal activity of complex heterogeneous systems into simple, interpretable representations. Here we apply this framework to simulated neural…

Neurons and Cognition · Quantitative Biology 2026-02-17 Cédric Allier , Larissa Heinrich , Magdalena Schneider , Stephan Saalfeld

A common goal in network modeling is to uncover the latent community structure present among nodes. For many real-world networks, the true connections consist of events arriving as streams, which are then aggregated to form edges, ignoring…

Social and Information Networks · Computer Science 2023-10-27 Guanhua Fang , Owen G. Ward , Tian Zheng

The task of the brain is to look for structure in the external input. We study a network of integrate-and-fire neurons with several types of recurrent connections that learns the structure of its time-varying feedforward input by attempting…

Neurons and Cognition · Quantitative Biology 2020-10-13 Lyudmila Kushnir , Sophie Denève

The neural mechanism of memory has a very close relation with the problem of representation in artificial intelligence. In this paper a computational model was proposed to simulate the network of neurons in brain and how they process…

Neurons and Cognition · Quantitative Biology 2020-12-02 Hui Wei

Many patterns in nature exhibit self-similarity: they can be compactly described via self-referential transformations. Said patterns commonly appear in natural and artificial objects, such as molecules, shorelines, galaxies and even images.…

Machine Learning · Computer Science 2022-04-19 Michael Poli , Winnie Xu , Stefano Massaroli , Chenlin Meng , Kuno Kim , Stefano Ermon

Many neural nets appear to represent data as linear combinations of "feature vectors." Algorithms for discovering these vectors have seen impressive recent success. However, we argue that this success is incomplete without an understanding…

Artificial Intelligence · Computer Science 2024-07-23 Martin Wattenberg , Fernanda B. Viégas

Recent advances in learning-based image compression typically come at the cost of high complexity. Designing computationally efficient architectures remains an open challenge. In this paper, we empirically investigate the impact of…

Image and Video Processing · Electrical Eng. & Systems 2024-06-18 Yichi Zhang , Zhihao Duan , Fengqing Zhu

In this review, we describe the singular success of attractor neural network models in describing how the brain maintains persistent activity states for working memory, error-corrects, and integrates noisy cues. We consider the mechanisms…

Neurons and Cognition · Quantitative Biology 2022-03-03 Mikail Khona , Ila R. Fiete

Experimental particle physics demands a sophisticated trigger and acquisition system capable to efficiently retain the collisions of interest for further investigation. Heterogeneous computing with the employment of FPGA cards may emerge as…

High Energy Physics - Experiment · Physics 2023-12-20 Andrea Coccaro , Francesco Armando Di Bello , Stefano Giagu , Lucrezia Rambelli , Nicola Stocchetti

This paper considers a convolutional neural network transformation that reduces computation complexity and thus speedups neural network processing. Usage of convolutional neural networks (CNN) is the standard approach to image recognition…

Computer Vision and Pattern Recognition · Computer Science 2020-02-19 Elena Limonova , Alexander Sheshkus , Dmitry Nikolaev

Neural networks with self-attention (a.k.a. Transformers) like ViT and Swin have emerged as a better alternative to traditional convolutional neural networks (CNNs). However, our understanding of how the new architecture works is still…

Computer Vision and Pattern Recognition · Computer Science 2023-12-15 Juyeop Kim , Junha Park , Songkuk Kim , Jong-Seok Lee

There is cognitive, neurological, and computational support for the hypothesis that defocusing attention results in divergent or associative thought, conducive to insight and finding unusual connections, while focusing attention results in…

Neurons and Cognition · Quantitative Biology 2019-07-02 Liane Gabora

The representations learned by deep neural networks are difficult to interpret in part due to their large parameter space and the complexities introduced by their multi-layer structure. We introduce a method for computing persistent…

Machine Learning · Computer Science 2019-05-31 Thomas Gebhart , Paul Schrater , Alan Hylton

Recent work suggests goal-driven training of neural networks can be used to model neural activity in the brain. While response properties of neurons in artificial neural networks bear similarities to those in the brain, the network…

Neurons and Cognition · Quantitative Biology 2020-05-19 Christopher J. Cueva , Peter Y. Wang , Matthew Chin , Xue-Xin Wei

Advances in neural recording methods enable sampling from populations of thousands of neurons during the performance of behavioral tasks, raising the question of how recorded activity relates to the theoretical models of computations…

Neurons and Cognition · Quantitative Biology 2020-07-01 Audrey J. Sederberg , Ilya Nemenman

It is now generally assumed that the heterogeneity of most networks in nature probably arises via preferential attachment of some sort. However, the origin of various other topological features, such as degree-degree correlations and…

Adaptation and Self-Organizing Systems · Physics 2010-03-05 Samuel Johnson , J. Marro , Joaquin J. Torres

Encoder-decoder networks with attention have proven to be a powerful way to solve many sequence-to-sequence tasks. In these networks, attention aligns encoder and decoder states and is often used for visualizing network behavior. However,…

Machine Learning · Computer Science 2021-10-29 Kyle Aitken , Vinay V Ramasesh , Yuan Cao , Niru Maheswaranathan

This paper presents a mathematically rigorous framework for brain-inspired representation learning founded on the interplay between persistent topological structures and cohomological flows. Neural computation is reformulated as the…

Machine Learning · Computer Science 2025-12-10 Preksha Girish , Rachana Mysore , Mahanthesha U , Shrey Kumar , Shipra Prashant