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Graph neural networks (GNNs) have been applied to a large variety of applications in materials science and chemistry. Here, we recapitulate the graph construction for crystalline (periodic) materials and investigate its impact on the GNNs…

Machine Learning · Computer Science 2023-08-10 Robin Ruff , Patrick Reiser , Jan Stühmer , Pascal Friederich

In recent years, Graph Convolutional Networks (GCNs) have achieved great success in learning from graph-structured data. With the growing tendency of graph nodes and edges, GCN training by single processor cannot meet the demand for time…

Machine Learning · Computer Science 2021-10-08 Taige Zhao , Xiangyu Song , Jianxin Li , Wei Luo , Imran Razzak

Training Graph Neural Networks (GNNs) on real-world graphs consisting of billions of nodes and edges is quite challenging, primarily due to the substantial memory needed to store the graph and its intermediate node and edge features, and…

Machine Learning · Computer Science 2023-08-08 Kaidi Cao , Rui Deng , Shirley Wu , Edward W Huang , Karthik Subbian , Jure Leskovec

Kernel conditional mean embeddings (CMEs) offer a powerful framework for representing conditional distribution, but they often face scalability and expressiveness challenges. In this work, we propose a new method that effectively combines…

Machine Learning · Statistics 2024-03-19 Eiki Shimizu , Kenji Fukumizu , Dino Sejdinovic

Developing accurate, transferable and computationally inexpensive machine learning models can rapidly accelerate the discovery and development of new materials. Some of the major challenges involved in developing such models are, (i)…

In recent years, substantial progress has been made on Graph Convolutional Networks (GCNs). However, the computing of GCN usually requires a large memory space for keeping the entire graph. In consequence, GCN is not flexible enough,…

Social and Information Networks · Computer Science 2020-11-05 Qiang Liu , Haoli Zhang , Zhaocheng Liu

Computational fluid dynamics (CFD) simulations are crucial in automotive, aerospace, maritime and medical applications, but are limited by the complexity, cost and computational requirements of directly calculating the flow, often taking…

Machine Learning · Computer Science 2024-11-27 Zachary Cooper-Baldock , Paulo E. Santos , Russell S. A. Brinkworth , Karl Sammut

Graph neural networks (GNNs) have seen extensive application in domains such as social networks, bioinformatics, and recommendation systems. However, the irregularity and sparsity of graph data challenge traditional computing methods, which…

Machine Learning · Computer Science 2025-02-25 Ka Wai Wu

Graph neural networks (GNNs) are powerful tools for exploring and learning from graph structures and features. As such, achieving high-performance execution for GNNs becomes crucially important. Prior works have proposed to explore the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-30 Yangjie Zhou , Yaoxu Song , Jingwen Leng , Zihan Liu , Weihao Cui , Zhendong Zhang , Cong Guo , Quan Chen , Li Li , Minyi Guo

Graph neural networks (GNNs) have emerged as powerful surrogates for mesh-based computational fluid dynamics (CFD), but training them on high-resolution unstructured meshes with hundreds of thousands of nodes remains prohibitively…

Machine Learning · Computer Science 2025-09-17 Paul Garnier , Vincent Lannelongue , Elie Hachem

Graph convolutional networks (GCNs) have shown remarkable learning capabilities when processing graph-structured data found inherently in many application areas. GCNs distribute the outputs of neural networks embedded in each vertex over…

Hardware Architecture · Computer Science 2022-05-18 Sumit K. Mandal , Gokul Krishnan , A. Alper Goksoy , Gopikrishnan Ravindran Nair , Yu Cao , Umit Y. Ogras

Coarse-grained (CG) molecular dynamics (MD) simulations can simulate large molecular complexes over extended timescales by reducing degrees of freedom. A critical step in CG modeling is the selection of the CG mapping algorithm, which…

Soft Condensed Matter · Physics 2025-07-23 Soumya Mondal , Subhanu Halder , Debarchan Basu , Sandeep Kumar , Tarak Karmakar

Gradient-domain machine learning (GDML) is an accurate and efficient approach to learn a molecular potential and associated force field based on the kernel ridge regression algorithm. Here, we demonstrate its application to learn an…

Computational Physics · Physics 2020-06-24 Jiang Wang , Stefan Chmiela , Klaus-Robert Müller , Frank Noè , Cecilia Clementi

Exact subgraph matching on large-scale graphs remains a challenging problem due to high computational complexity and distributed system constraints. Existing GNN-based path embedding (GNN-PE) frameworks achieve efficient exact matching on…

Databases · Computer Science 2026-04-21 Yu Wang , Hui Wang , Jiake Ge , Xin Wang

In recent years, graph neural networks (GNNs) have been widely applied in tackling combinatorial optimization problems. However, existing methods still suffer from limited accuracy when addressing that on complex graphs and exhibit poor…

Machine Learning · Computer Science 2025-11-13 Yuyao Long

As edge applications using convolutional neural networks (CNN) models grow, it is becoming necessary to introduce dedicated hardware accelerators in which network parameters and feature-map data are represented with limited precision. In…

Neural and Evolutionary Computing · Computer Science 2018-11-01 Doyun Kim , Han Young Yim , Sanghyuck Ha , Changgwun Lee , Inyup Kang

The Graph Convolutional Network (GCN) model and its variants are powerful graph embedding tools for facilitating classification and clustering on graphs. However, a major challenge is to reduce the complexity of layered GCNs and make them…

Machine Learning · Computer Science 2020-08-06 Hanqing Zeng , Hongkuan Zhou , Ajitesh Srivastava , Rajgopal Kannan , Viktor Prasanna

Graph Neural Networks (GNNs) are powerful deep learning models to generate node embeddings on graphs. When applying deep GNNs on large graphs, it is still challenging to perform training in an efficient and scalable way. We propose a novel…

Machine Learning · Computer Science 2020-10-08 Hanqing Zeng , Hongkuan Zhou , Ajitesh Srivastava , Rajgopal Kannan , Viktor Prasanna

This study presents novel predictive models using Graph Neural Networks (GNNs) for simulating thermal dynamics in Laser Powder Bed Fusion (L-PBF) processes. By developing and validating Single-Laser GNN (SL-GNN) and Multi-Laser GNN (ML-GNN)…

Machine Learning · Computer Science 2024-07-22 Riddhiman Raut , Amit Kumar Ball , Amrita Basak

Modern machine learning workloads use large models, with complex structures, that are very expensive to execute. The devices that execute complex models are becoming increasingly heterogeneous as we see a flourishing of domain-specific…

Machine Learning · Computer Science 2020-11-02 Jakub Tarnawski , Amar Phanishayee , Nikhil R. Devanur , Divya Mahajan , Fanny Nina Paravecino