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Weakly supervised learning with noisy data has drawn attention in the medical imaging community due to the sparsity of high-quality disease labels. However, little is known about the limitations of such weakly supervised learning and the…

Image and Video Processing · Electrical Eng. & Systems 2024-02-08 Fakrul Islam Tushar , Vincent M. D'Anniballe , Geoffrey D. Rubin , Joseph Y. Lo

Large-scale vision models like SAM have extensive visual knowledge, yet their general nature and computational demands limit their use in specialized tasks like medical image segmentation. In contrast, task-specific models such as U-Net++…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Yuchen Mao , Hongwei Li , Yinyi Lai , Giorgos Papanastasiou , Peng Qi , Yunjie Yang , Chengjia Wang

Semantic hashing is an emerging technique for large-scale similarity search based on representing high-dimensional data using similarity-preserving binary codes used for efficient indexing and search. It has recently been shown that…

Machine Learning · Computer Science 2023-08-11 Ricardo Ñanculef , Francisco Mena , Antonio Macaluso , Stefano Lodi , Claudio Sartori

Creating large, good quality labeled data has become one of the major bottlenecks for developing machine learning applications. Multiple techniques have been developed to either decrease the dependence of labeled data (zero/few-shot…

Computation and Language · Computer Science 2023-02-08 Abhinav Bohra , Huy Nguyen , Devashish Khatwani

Traditional supervised medical image segmentation models require large amounts of labeled data for training; however, obtaining such large-scale labeled datasets in the real world is extremely challenging. Recent semi-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-05-26 Yunyao Lu , Yihang Wu , Reem Kateb , Ahmad Chaddad

Fact triples are a common form of structured knowledge used within the biomedical domain. As the amount of unstructured scientific texts continues to grow, manual annotation of these texts for the task of relation extraction becomes…

Computation and Language · Computer Science 2020-05-27 Saadullah Amin , Katherine Ann Dunfield , Anna Vechkaeva , Günter Neumann

In ML-aided decision-making tasks, such as fraud detection or medical diagnosis, the human-in-the-loop, usually a domain-expert without technical ML knowledge, prefers high-level concept-based explanations instead of low-level explanations…

Machine Learning · Computer Science 2021-04-27 Catarina Belém , Vladimir Balayan , Pedro Saleiro , Pedro Bizarro

Weak supervision has shown promising results in many natural language processing tasks, such as Named Entity Recognition (NER). Existing work mainly focuses on learning deep NER models only with weak supervision, i.e., without any human…

Computation and Language · Computer Science 2021-08-03 Haoming Jiang , Danqing Zhang , Tianyu Cao , Bing Yin , Tuo Zhao

The increasing digitization of medical imaging enables machine learning based improvements in detecting, visualizing and segmenting lesions, easing the workload for medical experts. However, supervised machine learning requires reliable…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Maximilian E. Tschuchnig , Michael Gadermayr

Methods that move towards less supervised scenarios are key for image segmentation, as dense labels demand significant human intervention. Generally, the annotation burden is mitigated by labeling datasets with weaker forms of supervision,…

Computer Vision and Pattern Recognition · Computer Science 2019-05-27 Miriam Bellver , Amaia Salvador , Jordi Torres , Xavier Giro-i-Nieto

Labeling training data is a key bottleneck in the modern machine learning pipeline. Recent weak supervision approaches combine labels from multiple noisy sources by estimating their accuracies without access to ground truth labels; however,…

Machine Learning · Statistics 2019-03-15 Paroma Varma , Frederic Sala , Ann He , Alexander Ratner , Christopher Ré

\begin{abstract} Learning-based methods suffer from a deficiency of clean annotations, especially in biomedical segmentation. Although many semi-supervised methods have been proposed to provide extra training data, automatically generated…

Computer Vision and Pattern Recognition · Computer Science 2018-12-27 Shaobo Min , Xuejin Chen , Zheng-Jun Zha , Feng Wu , Yongdong Zhang

Human activity recognition (HAR) using wearable sensors has advanced through various machine learning paradigms, each with inherent trade-offs between performance and labeling requirements. While fully supervised techniques achieve high…

Machine Learning · Computer Science 2025-12-24 Taoran Sheng , Manfred Huber

Training a neural network with a large labeled dataset is still a dominant paradigm in computational histopathology. However, obtaining such exhaustive manual annotations is often expensive, laborious, and prone to inter and Intra-observer…

Computer Vision and Pattern Recognition · Computer Science 2021-11-03 Chetan L. Srinidhi , Seung Wook Kim , Fu-Der Chen , Anne L. Martel

Weak-strong consistency learning strategies are widely employed in semi-supervised medical image segmentation to train models by leveraging limited labeled data and enforcing weak-to-strong consistency. However, existing methods primarily…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Chaowei Chen , Xiang Zhang , Honglie Guo , Shunfang Wang

Objective: Semantic indexing of biomedical literature is usually done at the level of MeSH descriptors with several related but distinct biomedical concepts often grouped together and treated as a single topic. This study proposes a new…

Computation and Language · Computer Science 2023-10-06 Anastasios Nentidis , Thomas Chatzopoulos , Anastasia Krithara , Grigorios Tsoumakas , Georgios Paliouras

Knowledge base construction is crucial for summarising, understanding and inferring relationships between biomedical entities. However, for many practical applications such as drug discovery, the scarcity of relevant facts (e.g. gene X is…

Computation and Language · Computer Science 2019-07-04 Julien Fauqueur , Ashok Thillaisundaram , Theodosia Togia

The recent success of deep neural networks is powered in part by large-scale well-labeled training data. However, it is a daunting task to laboriously annotate an ImageNet-like dateset. On the contrary, it is fairly convenient, fast, and…

Computer Vision and Pattern Recognition · Computer Science 2018-03-23 Yifan Ding , Liqiang Wang , Deliang Fan , Boqing Gong

Noisy labels can significantly impact medical image classification, particularly in deep learning, by corrupting learned features. Self-supervised pretraining, which doesn't rely on labeled data, can enhance robustness against noisy labels.…

Image and Video Processing · Electrical Eng. & Systems 2024-01-17 Bidur Khanal , Binod Bhattarai , Bishesh Khanal , Cristian Linte

Supervised training of deep learning models requires large labeled datasets. There is a growing interest in obtaining such datasets for medical image analysis applications. However, the impact of label noise has not received sufficient…

Computer Vision and Pattern Recognition · Computer Science 2020-03-24 Davood Karimi , Haoran Dou , Simon K. Warfield , Ali Gholipour