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The electrocardiogram (ECG) is an inexpensive and widely available tool for cardiovascular assessment. Despite its standardized format and small file size, the high complexity and inter-individual variability of ECG signals (typically a…
Biomedical imaging and RNA sequencing with single-cell resolution improves our understanding of white blood cell diseases like leukemia. By combining morphological and transcriptomic data, we can gain insights into cellular functions and…
Data preprocessing is a critical part of time series data analysis. Data from connected medical devices often have missing or abnormal values during acquisition. Handling such situations requires additional assumptions and domain knowledge.…
Remote photoplethysmography (rPPG), which aims at measuring heart activities without any contact, has great potential in many applications (e.g., remote healthcare). Existing end-to-end rPPG and heart rate (HR) measurement methods from…
Electrocardiogram (ECG) signals play a crucial role in diagnosing cardiovascular diseases. To reduce power consumption in wearable or portable devices used for long-term ECG monitoring, super-resolution (SR) techniques have been developed,…
Detecting seizure using brain neuroactivations recorded by intracranial electroencephalogram (iEEG) has been widely used for monitoring, diagnosing, and closed-loop therapy of epileptic patients, however, computational efficiency gains are…
SelfEEG is an open-source Python library developed to assist researchers in conducting Self-Supervised Learning (SSL) experiments on electroencephalography (EEG) data. Its primary objective is to offer a user-friendly but highly…
Accurate and robust prediction of patient's response to drug treatments is critical for developing precision medicine. However, it is often difficult to obtain a sufficient amount of coherent drug response data from patients directly for…
In this paper, we introduce an autoencoder (AE)-based scheme for end-to-end optimization of a multi-user molecule mixture communication system. In the proposed scheme, each transmitter leverages an encoder network that maps the user symbol…
This paper introduces a Bayesian framework to detect multiple signals embedded in noisy observations from a sensor array. For various states of knowledge on the communication channel and the noise at the receiving sensors, a marginalization…
Machine learning methods provide a methodological innovation that can help screen for cardiovascular disease through noninvasive and readily available measurement modalities. Recent investments in using electrocardiogram (ECG) data to…
We introduce the concept of a Modular Autoencoder (MAE), capable of learning a set of diverse but complementary representations from unlabelled data, that can later be used for supervised tasks. The learning of the representations is…
We propose a maximum entropy (ME) based approach to smooth noise not only in data but also to noise amplified by second order derivative calculation of the data especially for electroencephalography (EEG) studies. The approach includes two…
Accurate analysis of microscopy images is hindered by the presence of noise. This noise is usually signal-dependent and often additionally correlated along rows or columns of pixels. Current self- and unsupervised denoisers can address…
Deep learning on an edge device requires energy efficient operation due to ever diminishing power budget. Intentional low quality data during the data acquisition for longer battery life, and natural noise from the low cost sensor degrade…
Multi-channel photoplethysmography (PPG) sensors have found widespread adoption in wearable devices for monitoring cardiac health. Channels thereby serve different functions -- whereas green is commonly used for metrics such as heart rate…
Sensor and control data of modern mechatronic systems are often available as heterogeneous time series with different sampling rates and value ranges. Suitable classification and regression methods from the field of supervised machine…
Inter-beat interval (IBI) measurement enables estimation of heart-rate variability (HRV) which, in turns, can provide early indication of potential cardiovascular diseases. However, extracting IBIs from noisy signals is challenging since…
Continuous blood pressure (BP) estimation via photoplethysmography (PPG) remains a significant challenge, particularly in providing comprehensive cardiovascular insights for hypertensive complications. This study presents a novel…
Extracting the desired speech from a mixture is a meaningful and challenging task. The end-to-end DNN-based methods, though attractive, face the problem of generalization. In this paper, we explore a sequential approach for target speech…