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Unsupervised representation learning methods are widely used for gaining insight into high-dimensional, unstructured, or structured data. In some cases, users may have prior topological knowledge about the data, such as a known cluster…

Machine Learning · Computer Science 2023-11-08 Edith Heiter , Robin Vandaele , Tijl De Bie , Yvan Saeys , Jefrey Lijffijt

Graph convolutional networks (GCNs) have been attracting widespread attentions due to their encouraging performance and powerful generalizations. However, few work provide a general view to interpret various GCNs and guide GCNs' designs. In…

Machine Learning · Computer Science 2023-07-04 Shiping Wang , Zhihao Wu , Yuhong Chen , Yong Chen

Graph Neural Networks (GNNs) have demonstrated remarkable success in various domains such as social networks, molecular chemistry, and more. A crucial component of GNNs is the pooling procedure, in which the node features calculated by the…

Machine Learning · Computer Science 2026-05-19 Yaniv Galron , Hadar Sinai , Haggai Maron , Moshe Eliasof

Graph convolutional neural networks (GCNNs) have been widely used in graph learning. It has been observed that the smoothness functional on graphs can be defined in terms of the graph Laplacian. This fact points out in the direction of…

Machine Learning · Computer Science 2020-09-30 Asif Salim , Sumitra S

Graph Neural Networks (GNNs) have emerged as a promising tool to handle data exhibiting an irregular structure. However, most GNN architectures perform well on homophilic datasets, where the labels of neighboring nodes are likely to be the…

Machine Learning · Computer Science 2024-12-03 Victor M. Tenorio , Madeline Navarro , Samuel Rey , Santiago Segarra , Antonio G. Marques

Graph Neural Networks (GNNs) have proven to be effective in processing and learning from graph-structured data. However, previous works mainly focused on understanding single graph inputs while many real-world applications require pair-wise…

Machine Learning · Computer Science 2023-07-31 Junhyun Lee , Bumsoo Kim , Minji Jeon , Jaewoo Kang

Graph neural networks (GNNs) are the most widely adopted model in graph-structured data oriented learning and representation. Despite their extraordinary success in real-world applications, understanding their working mechanism by theory is…

Machine Learning · Computer Science 2023-05-16 Huayi Tang , Yong Liu

This paper studies the problem of distribution shifts on non-homophilous graphs Mosting existing graph neural network methods rely on the homophilous assumption that nodes from the same class are more likely to be linked. However, such…

Machine Learning · Computer Science 2025-08-18 Jinluan Yang , Ruihao Zhang , Zhengyu Chen , Teng Xiao , Yueyang Wang , Fei Wu , Kun Kuang

Graph neural networks achieve high accuracy in link prediction by jointly leveraging graph topology and node attributes. Topology, however, is represented indirectly; state-of-the-art methods based on subgraph classification label nodes…

Machine Learning · Computer Science 2022-03-17 Liming Pan , Cheng Shi , Ivan Dokmanić

Graph neural networks (GNNs) have been extensively studied for prediction tasks on graphs. As pointed out by recent studies, most GNNs assume local homophily, i.e., strong similarities in local neighborhoods. This assumption however limits…

Machine Learning · Computer Science 2021-10-04 Sean Li , Dongwoo Kim , Qing Wang

Classifying whole images is a classic problem in machine learning, and graph neural networks are a powerful methodology to learn highly irregular geometries. It is often the case that certain parts of a point cloud are more important than…

Computer Vision and Pattern Recognition · Computer Science 2020-03-19 Lindsey Gray , Thomas Klijnsma , Shamik Ghosh

Graph Neural Networks (GNNs) have achieved significant success in various learning tasks on graph-structured data. Nevertheless, most GNNs struggle to generalize to heterophilic neighborhoods. Additionally, many GNNs ignore the directional…

Machine Learning · Computer Science 2026-01-14 Aihu Zhang , Jiaxing Xu , Mengcheng Lan , Shili Xiang , Yiping Ke

Graph Neural Networks (GNNs) have evolved to understand graph structures through recursive exchanges and aggregations among nodes. To enhance robustness, self-supervised learning (SSL) has become a vital tool for data augmentation.…

Computation and Language · Computer Science 2024-05-08 Jiabin Tang , Yuhao Yang , Wei Wei , Lei Shi , Lixin Su , Suqi Cheng , Dawei Yin , Chao Huang

Graph pooling is commonly applied in graph classification, yet its empirical gains over standard WL-1 expressive GNNs are often marginal or inconsistent. We study this gap by analysing the interaction between node features and graph…

Machine Learning · Computer Science 2026-05-08 Jan von Pichowski , Alžbeta Hrabošová , Ingo Scholtes , Christopher Blöcker

Inferring missing links or detecting spurious ones based on observed graphs, known as link prediction, is a long-standing challenge in graph data analysis. With the recent advances in deep learning, graph neural networks have been used for…

Social and Information Networks · Computer Science 2023-01-03 Xingping Xian , Tao Wu , Xiaoke Ma , Shaojie Qiao , Yabin Shao , Chao Wang , Lin Yuan , Yu Wu

Graph-structured data plays a vital role in numerous domains, such as social networks, citation networks, commonsense reasoning graphs and knowledge graphs. While graph neural networks have been employed for graph processing, recent…

Computation and Language · Computer Science 2026-05-19 Wooyoung Kim , Byungyoon Park , Wooju Kim

Explaining graph neural networks (GNNs) has become more and more important recently. Higher-order interpretation schemes, such as GNN-LRP (layer-wise relevance propagation for GNN), emerged as powerful tools for unraveling how different…

Machine Learning · Computer Science 2026-05-22 Ping Xiong , Thomas Schnake , Grégoire Montavon , Klaus-Robert Müller , Shinichi Nakajima

The complexity and non-Euclidean structure of graph data hinder the development of data augmentation methods similar to those in computer vision. In this paper, we propose a feature augmentation method for graph nodes based on topological…

Machine Learning · Computer Science 2021-04-07 Rui Song , Fausto Giunchiglia , Ke Zhao , Hao Xu

Spectral clustering (SC) is a popular clustering technique to find strongly connected communities on a graph. SC can be used in Graph Neural Networks (GNNs) to implement pooling operations that aggregate nodes belonging to the same cluster.…

Machine Learning · Computer Science 2021-01-01 Filippo Maria Bianchi , Daniele Grattarola , Cesare Alippi

Graph Neural Networks (GNNs) draw their strength from explicitly modeling the topological information of structured data. However, existing GNNs suffer from limited capability in capturing the hierarchical graph representation which plays…

Machine Learning · Computer Science 2021-03-30 Jinyu Yang , Peilin Zhao , Yu Rong , Chaochao Yan , Chunyuan Li , Hehuan Ma , Junzhou Huang
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