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We discover a robust self-supervised strategy tailored towards molecular representations for generative masked language models through a series of tailored, in-depth ablations. Using this pre-training strategy, we train BARTSmiles, a…

In differentiable neural architecture search (NAS) algorithms like DARTS, the training set used to update model weight and the validation set used to update model architectures are sampled from the same data distribution. Thus, the uncommon…

Machine Learning · Computer Science 2021-12-02 Ruisi Zhang , Youwei Liang , Sai Ashish Somayajula , Pengtao Xie

As a multitude of capable machine learning (ML) models become widely available in forms such as open-source software and public APIs, central questions remain regarding their use in real-world applications, especially in high-stakes…

Machine Learning · Computer Science 2024-06-03 Dimitris Bertsimas , Matthew Peroni

This work presents a novel method for task optimization in industrial plants using quantum-inspired tensor network technology. This method obtains the best possible combination of tasks on a set of machines with directed constraints while…

The development of efficient machine learning models for molecular systems representation is becoming crucial in scientific research. We introduce TensorNet, an innovative O(3)-equivariant message-passing neural network architecture that…

Machine Learning · Computer Science 2023-10-31 Guillem Simeon , Gianni de Fabritiis

We introduce the Learning Hyperplane Tree (LHT), a novel oblique decision tree model designed for expressive and interpretable classification. LHT fundamentally distinguishes itself through a non-iterative, statistically-driven approach to…

Machine Learning · Computer Science 2025-05-08 Hongyi Li , Jun Xu , William Ward Armstrong

The use of machine learning algorithms in finance, medicine, and criminal justice can deeply impact human lives. As a consequence, research into interpretable machine learning has rapidly grown in an attempt to better control and fix…

Machine Learning · Computer Science 2021-02-02 Thibaut Vidal , Toni Pacheco , Maximilian Schiffer

We present an integrated approach for structure and parameter estimation in latent tree graphical models. Our overall approach follows a "divide-and-conquer" strategy that learns models over small groups of variables and iteratively merges…

Machine Learning · Computer Science 2019-12-19 Furong Huang , Niranjan U. N. , Ioakeim Perros , Robert Chen , Jimeng Sun , Anima Anandkumar

Decision trees have been widely used as classifiers in many machine learning applications thanks to their lightweight and interpretable decision process. This paper introduces Tree in Tree decision graph (TnT), a framework that extends the…

Machine Learning · Computer Science 2021-11-01 Bingzhao Zhu , Mahsa Shoaran

Recent advancements in microbiology have motivated the study of the production of nanostructures with applications such as biomedical computing and molecular robotics. One way to construct these structures is to construct branched DNA…

Machine learning applications such as finance and medicine demand accurate and justifiable predictions, barring most deep learning methods from use. In response, previous work combines decision trees with deep learning, yielding models that…

Computer Vision and Pattern Recognition · Computer Science 2021-01-29 Alvin Wan , Lisa Dunlap , Daniel Ho , Jihan Yin , Scott Lee , Henry Jin , Suzanne Petryk , Sarah Adel Bargal , Joseph E. Gonzalez

We consider the task of discovering gene regulatory networks, which are defined as sets of genes and the corresponding transcription factors which regulate their expression levels. This can be viewed as a variable selection problem,…

Methodology · Statistics 2014-12-04 Justin Bleich , Adam Kapelner , Edward I. George , Shane T. Jensen

Self-supervised neural language models have recently achieved unprecedented success, from natural language processing to learning the languages of biological sequences and organic molecules. These models have demonstrated superior…

Flow network models can capture the underlying physics and operational constraints of many networked systems including the power grid and transportation and water networks. However, analyzing reliability of systems using computationally…

Machine Learning · Computer Science 2021-09-14 Nariman L. Dehghani , Soroush Zamanian , Abdollah Shafieezadeh

Neural Architecture Search (NAS) has emerged as one of the effective methods to design the optimal neural network architecture automatically. Although neural architectures have achieved human-level performances in several tasks, few of them…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Caiyang Yu , Xianggen Liu , Yifan Wang , Yun Liu , Wentao Feng , Deng Xiong , Chenwei Tang , Jiancheng Lv

Monumental advances in deep learning have led to unprecedented achievements across various domains. While the performance of deep neural networks is indubitable, the architectural design and interpretability of such models are nontrivial.…

Machine Learning · Computer Science 2023-07-06 Zachariah Carmichael , Tim Moon , Sam Ade Jacobs

With the rapid growth of renewable energy, lots of small photovoltaic (PV) prosumers emerge. Due to the uncertainty of solar power generation, there is a need for aggregated prosumers to predict solar power generation and whether solar…

Machine Learning · Computer Science 2021-06-23 Yucun Lu , Ilgiz Murzakhanov , Spyros Chatzivasileiadis

Decision-making in complex systems often relies on machine learning models, yet highly accurate models such as XGBoost and neural networks can obscure the reasoning behind their predictions. In operations research applications,…

Machine Learning · Computer Science 2025-02-28 Gaurav Arwade , Sigurdur Olafsson

Despite much work on advanced deep learning and generative modeling techniques for tabular data generation and imputation, traditional methods have continued to win on imputation benchmarks. We herein present UnmaskingTrees, a simple method…

Machine Learning · Computer Science 2025-07-24 Calvin McCarter

Decision tree optimization is fundamental to interpretable machine learning. The most popular approach is to greedily search for the best feature at every decision point, which is fast but provably suboptimal. Recent approaches find the…

Machine Learning · Computer Science 2025-11-19 Varun Babbar , Hayden McTavish , Cynthia Rudin , Margo Seltzer