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Hierarchical clustering is a popular unsupervised data analysis method. For many real-world applications, we would like to exploit prior information about the data that imposes constraints on the clustering hierarchy, and is not captured by…

Data Structures and Algorithms · Computer Science 2018-07-17 Vaggos Chatziafratis , Rad Niazadeh , Moses Charikar

A novel method to obtain hierarchical and overlapping clusters from network data -i.e., a set of nodes endowed with pairwise dissimilarities- is presented. The introduced method is hierarchical in the sense that it outputs a nested…

Social and Information Networks · Computer Science 2017-12-13 Fernando Gama , Santiago Segarra , Alejandro Ribeiro

We present a new multi-layer peeling technique to cluster points in a metric space. A well-known non-parametric objective is to embed the metric space into a simpler structured metric space such as a line (i.e., Linear Arrangement) or a…

Data Structures and Algorithms · Computer Science 2023-05-03 Yossi Azar , Danny Vainstein

We study the problem of hierarchical clustering on planar graphs. We formulate this in terms of an LP relaxation of ultrametric rounding. To solve this LP efficiently we introduce a dual cutting plane scheme that uses minimum cost perfect…

Data Structures and Algorithms · Computer Science 2015-09-11 Julian Yarkony , Charless C. Fowlkes

We study the cost function for hierarchical clusterings introduced by [arXiv:1510.05043] where hierarchies are treated as first-class objects rather than deriving their cost from projections into flat clusters. It was also shown in…

Machine Learning · Computer Science 2016-10-31 Aurko Roy , Sebastian Pokutta

We study the problem of fitting an ultrametric distance to a dissimilarity graph in the context of hierarchical cluster analysis. Standard hierarchical clustering methods are specified procedurally, rather than in terms of the cost function…

Machine Learning · Computer Science 2021-02-03 Giovanni Chierchia , Benjamin Perret

Correlation Clustering is a fundamental and widely-studied problem in unsupervised learning and data mining. The input is a graph and the goal is to construct a clustering minimizing the number of inter-cluster edges plus the number of…

Data Structures and Algorithms · Computer Science 2025-11-05 Nairen Cao , Vincent Cohen-Addad , Shi Li , Euiwoong Lee , David Rasmussen Lolck , Alantha Newman , Mikkel Thorup , Lukas Vogl , Shuyi Yan , Hanwen Zhang

Hierarchical clustering is a powerful tool for exploratory data analysis, organizing data into a tree of clusterings from which a partition can be chosen. This paper generalizes these ideas by proving that, for any reasonable hierarchy, one…

Machine Learning · Computer Science 2025-11-13 Andrew Draganov , Pascal Weber , Rasmus Skibdahl Melanchton Jørgensen , Anna Beer , Claudia Plant , Ira Assent

Hierarchical clustering is a class of algorithms that seeks to build a hierarchy of clusters. It has been the dominant approach to constructing embedded classification schemes since it outputs dendrograms, which capture the hierarchical…

Machine Learning · Statistics 2018-08-28 Xiaofei Ma , Satya Dhavala

Given a complete graph $G = (V, E)$ where each edge is labeled $+$ or $-$, the Correlation Clustering problem asks to partition $V$ into clusters to minimize the number of $+$edges between different clusters plus the number of $-$edges…

Data Structures and Algorithms · Computer Science 2023-05-04 Vincent Cohen-Addad , Euiwoong Lee , Alantha Newman

We consider a generalized version of the correlation clustering problem, defined as follows. Given a complete graph $G$ whose edges are labeled with $+$ or $-$, we wish to partition the graph into clusters while trying to avoid errors: $+$…

Data Structures and Algorithms · Computer Science 2016-05-25 Gregory J. Puleo , Olgica Milenkovic

Correlation clustering seeks a partition of the vertex set of a given graph/network into groups of closely related, or just close enough, vertices so that elements of different groups are not close to each other. The problem has been…

Social and Information Networks · Computer Science 2024-12-05 Faisal N. Abu-Khzam , Lucas Isenmann , Sergio Thoumi

Hierarchical clustering is a critical task in numerous domains. Many approaches are based on heuristics and the properties of the resulting clusterings are studied post hoc. However, in several applications, there is a natural cost function…

The primary goal in cluster analysis is to discover natural groupings of objects. The field of cluster analysis is crowded with diverse methods that make special assumptions about data and address different scientific aims. Despite its…

Genomics · Quantitative Biology 2018-06-07 Gary K. Chen , Eric Chi , John Ranola , Kenneth Lange

We study hierarchical clusterings of metric spaces that change over time. This is a natural geometric primitive for the analysis of dynamic data sets. Specifically, we introduce and study the problem of finding a temporally coherent…

Data Structures and Algorithms · Computer Science 2017-10-23 Tamal K. Dey , Alfred Rossi , Anastasios Sidiropoulos

The applicability of agglomerative clustering, for inferring both hierarchical and flat clustering, is limited by its scalability. Existing scalable hierarchical clustering methods sacrifice quality for speed and often lead to over-merging…

Hierarchical clustering is a stronger extension of one of today's most influential unsupervised learning methods: clustering. The goal of this method is to create a hierarchy of clusters, thus constructing cluster evolutionary history and…

Data Structures and Algorithms · Computer Science 2021-01-14 MohammadTaghi Hajiaghayi , Marina Knittel

In this paper, we study a number of well-known combinatorial optimization problems that fit in the following paradigm: the input is a collection of (potentially inconsistent) local relationships between the elements of a ground set (e.g.,…

Data Structures and Algorithms · Computer Science 2021-02-24 Vaggos Chatziafratis , Mohammad Mahdian , Sara Ahmadian

In this work, we introduce a novel methodology for divisive hierarchical clustering. Our divisive (``top-down'') approach is motivated by the fact that agglomerative hierarchical clustering (``bottom-up''), which is commonly used for…

Methodology · Statistics 2025-10-07 Jan O. Bauer

Clustering is a fundamental analysis tool aiming at classifying data points into groups based on their similarity or distance. It has found successful applications in all natural and social sciences, including biology, physics, economics,…

Information Retrieval · Computer Science 2021-02-24 Wen-Bo Xie , Yan-Li Lee , Cong Wang , Duan-Bing Chen , Tao Zhou
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