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Related papers: Leveraging State Space Models in Long Range Genomi…

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Continuous-time state-space models (SSMs) are flexible tools for analysing irregularly sampled sequential observations that are driven by an underlying state process. Corresponding applications typically involve restrictive assumptions…

Methodology · Statistics 2020-10-29 Sina Mews , Roland Langrock , Marius Ötting , Houda Yaqine , Jost Reinecke

Transformers dominate NLP and IR; but their inference inefficiencies and challenges in extrapolating to longer contexts have sparked interest in alternative model architectures. Among these, state space models (SSMs) like Mamba offer…

Computation and Language · Computer Science 2025-04-23 Zhichao Xu , Jinghua Yan , Ashim Gupta , Vivek Srikumar

State Space Models (SSMs) and Hidden Markov Models (HMMs) are foundational frameworks for modeling sequential data with latent variables and are widely used in signal processing, control theory, and machine learning. Despite their shared…

Machine Learning · Computer Science 2026-01-21 Aydin Ghojogh , M. Hadi Sepanj , Benyamin Ghojogh

State-Space Models (SSMs) -- structured SSMs (S4, S4D, DSS, S5), selective SSMs (Mamba, Mamba-2), and hybrid architectures (Jamba) -- are deployed in safety-critical long-context applications: genomic analysis, clinical time-series…

Cryptography and Security · Computer Science 2026-04-21 Manoj Parmar

Recurrent Neural Networks (RNNs) offer fast inference on long sequences but are hard to optimize and slow to train. Deep state-space models (SSMs) have recently been shown to perform remarkably well on long sequence modeling tasks, and have…

Machine Learning · Computer Science 2023-03-14 Antonio Orvieto , Samuel L Smith , Albert Gu , Anushan Fernando , Caglar Gulcehre , Razvan Pascanu , Soham De

Linear State Space Models (SSMs) offer remarkable performance gains in efficient sequence modeling, with constant inference-time computation and memory complexity. Recent advances, such as Mamba, further enhance SSMs with input-dependent…

Machine Learning · Computer Science 2025-06-24 Zheng Zhan , Liliang Ren , Shuohang Wang , Liyuan Liu , Yang Liu , Yeyun Gong , Yanzhi Wang , Yelong Shen

State space models (SSMs) have emerged as an efficient alternative to Transformer models for language modeling, offering linear computational complexity and constant memory usage as context length increases. However, despite their…

Computation and Language · Computer Science 2025-04-23 Zhifan Ye , Kejing Xia , Yonggan Fu , Xin Dong , Jihoon Hong , Xiangchi Yuan , Shizhe Diao , Jan Kautz , Pavlo Molchanov , Yingyan Celine Lin

Recent advances in deep learning have mainly relied on Transformers due to their data dependency and ability to learn at scale. The attention module in these architectures, however, exhibits quadratic time and space in input size, limiting…

Machine Learning · Computer Science 2024-07-25 Ali Behrouz , Michele Santacatterina , Ramin Zabih

Large pre-trained models have achieved outstanding results in sequence modeling. The Transformer block and its attention mechanism have been the main drivers of the success of these models. Recently, alternative architectures, such as…

Machine Learning · Computer Science 2025-01-29 J. Pablo Muñoz , Jinjie Yuan , Nilesh Jain

In the quest for next-generation sequence modeling architectures, State Space Models (SSMs) have emerged as a potent alternative to transformers, particularly for their computational efficiency and suitability for dynamical systems. This…

Machine Learning · Computer Science 2024-06-17 Steven Abreu , Jens E. Pedersen , Kade M. Heckel , Alessandro Pierro

Deep state space models (SSMs) are an actively researched model class for temporal models developed in the deep learning community which have a close connection to classic SSMs. The use of deep SSMs as a black-box identification model can…

Systems and Control · Electrical Eng. & Systems 2021-06-21 Daniel Gedon , Niklas Wahlström , Thomas B. Schön , Lennart Ljung

Mamba, a special case of the State Space Model, is gaining popularity as an alternative to template-based deep learning approaches in medical image analysis. While transformers are powerful architectures, they have drawbacks, including…

State-space models (SSMs) face a fundamental trade-off between efficiency and expressivity that is mainly dictated by the structure of the model's transition matrix. Unstructured transition matrices enable maximal expressivity, as measured…

State Space Models (SSMs) like Mamba2 are a promising alternative to Transformers, with faster theoretical training and inference times -- especially for long context lengths. Recent work on Matryoshka Representation Learning -- and its…

Machine Learning · Computer Science 2024-10-10 Abhinav Shukla , Sai Vemprala , Aditya Kusupati , Ashish Kapoor

Hybrid sequence models--combining Transformer and state-space model layers--seek to gain the expressive versatility of attention as well as the computational efficiency of state-space model layers. Despite burgeoning interest in hybrid…

Machine Learning · Computer Science 2026-03-11 John Cooper , Ilias Diakonikolas , Mingchen Ma , Frederic Sala

Foundation models are typically trained at a fixed computational capacity, while real-world applications require deployment across platforms with different resource constraints. Current approaches usually rely on training families of model…

Machine Learning · Computer Science 2026-02-10 Dachuan Song , Xuan Wang

Recent advancements in State Space Models (SSMs) have attracted significant interest, particularly in models optimized for parallel training and handling long-range dependencies. Architectures like Mamba have scaled to billions of…

Machine Learning · Computer Science 2024-10-22 Zheng Zhan , Yushu Wu , Zhenglun Kong , Changdi Yang , Yifan Gong , Xuan Shen , Xue Lin , Pu Zhao , Yanzhi Wang

State space models (SSMs) have demonstrated state-of-the-art sequence modeling performance in some modalities, but underperform attention in language modeling. Moreover, despite scaling nearly linearly in sequence length instead of…

Machine Learning · Computer Science 2023-05-02 Daniel Y. Fu , Tri Dao , Khaled K. Saab , Armin W. Thomas , Atri Rudra , Christopher Ré

State space models (SSMs) are a flexible approach to modeling complex time series. However, inference in SSMs is often computationally prohibitive for long time series. Stochastic gradient MCMC (SGMCMC) is a popular method for scalable…

Machine Learning · Statistics 2019-07-11 Christopher Aicher , Yi-An Ma , Nicholas J. Foti , Emily B. Fox

The depth of neural networks is a critical factor for their capability, with deeper models often demonstrating superior performance. Motivated by this, significant efforts have been made to enhance layer aggregation - reusing information…

Machine Learning · Computer Science 2025-02-18 Qinshuo Liu , Weiqin Zhao , Wei Huang , Yanwen Fang , Lequan Yu , Guodong Li