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Handling graph data is one of the most difficult tasks. Traditional techniques, such as those based on geometry and matrix factorization, rely on assumptions about the data relations that become inadequate when handling large and complex…

Machine Learning · Computer Science 2024-04-15 Zhenyu Qian , Yiming Qian , Yuting Song , Fei Gao , Hai Jin , Chen Yu , Xia Xie

Generalized latent factor analysis not only provides a useful latent embedding approach in statistics and machine learning, but also serves as a widely used tool across various scientific fields, such as psychometrics, econometrics, and…

Methodology · Statistics 2025-08-11 Chengyu Cui , Gongjun Xu

This paper explores the use of factor graphs as an inference and analysis tool for Bayesian peer-to-peer decentralized data fusion. We propose a framework by which agents can each use local factor graphs to represent relevant partitions of…

Robotics · Computer Science 2023-03-07 Ofer Dagan , Nisar R. Ahmed

Lagrangian descriptors provide a global dynamical picture of the geometric structures for arbitrarily time-dependent flows with broad applications. This paper develops a mathematical framework for computing Lagrangian descriptors when…

Fluid Dynamics · Physics 2023-07-11 Nan Chen , Evelyn Lunasin , Stephen Wiggins

A large number of applications such as querying sensor networks, and analyzing protein-protein interaction (PPI) networks, rely on mining uncertain graph and hypergraph databases. In this work we study the following problem: given an…

Data Structures and Algorithms · Computer Science 2018-01-11 Charalampos E. Tsourakakis , Shreyas Sekar , Johnson Lam , Liu Yang

This paper addresses the problem of learning an undirected graph from data gathered at each nodes. Within the graph signal processing framework, the topology of such graph can be linked to the support of the conditional correlation matrix…

Machine Learning · Computer Science 2025-06-13 Thu Ha Phi , Alexandre Hippert-Ferrer , Florent Bouchard , Arnaud Breloy

Data collected nowadays by social-networking applications create fascinating opportunities for building novel services, as well as expanding our understanding about social structures and their dynamics. Unfortunately, publishing…

Databases · Computer Science 2016-11-11 Paolo Boldi , Francesco Bonchi , Aris Gionis , Tamir Tassa

Probabilistic dependency graphs (PDGs) are a flexible class of probabilistic graphical models, subsuming Bayesian Networks and Factor Graphs. They can also capture inconsistent beliefs, and provide a way of measuring the degree of this…

Data Structures and Algorithms · Computer Science 2023-11-10 Oliver E. Richardson , Joseph Y. Halpern , Christopher De Sa

Iterative Proportional Fitting (IPF), combined with EM, is commonly used as an algorithm for likelihood maximization in undirected graphical models. In this paper, we present two iterative algorithms that generalize upon IPF. The first one…

Machine Learning · Computer Science 2013-01-07 Wim Wiegerinck , Tom Heskes

In this letter, we propose a new identification criterion that guarantees the recovery of the low-rank latent factors in the nonnegative matrix factorization (NMF) model, under mild conditions. Specifically, using the proposed criterion, it…

Machine Learning · Computer Science 2018-03-14 Xiao Fu , Kejun Huang , Nicholas D. Sidiropoulos

We present a new probabilistic modelling framework based on the recent notion of normal factor graph (NFG). We show that the proposed NFG models and their transformations unify some existing models such as factor graphs, convolutional…

Information Theory · Computer Science 2012-09-17 Ali Al-Bashabsheh , Yongyi Mao

Graph diffusion models have gained significant attention in graph generation tasks, but they often inherit and amplify topology biases from sensitive attributes (e.g. gender, age, region), leading to unfair synthetic graphs. Existing fair…

Machine Learning · Computer Science 2026-03-03 Wendi Wang , Jiaxi Yang , Yongkang Du , Lu Lin

We present a family of novel methods for embedding knowledge graphs into real-valued tensors. These tensor-based embeddings capture the ordered relations that are typical in the knowledge graphs represented by semantic web languages like…

Machine Learning · Computer Science 2022-08-25 Ankur Padia , Kostantinos Kalpakis , Francis Ferraro , Tim Finin

We propose an algorithm to uncover the intrinsic low-rank component of a high-dimensional, graph-smooth and grossly-corrupted dataset, under the situations that the underlying graph is unknown. Based on a model with a low-rank component…

Computer Vision and Pattern Recognition · Computer Science 2018-03-07 Rui Liu , Hossein Nejati , Seyed Hamid Safavi , Ngai-Man Cheung

Graphical models represent multivariate and generally not normalized probability distributions. Computing the normalization factor, called the partition function, is the main inference challenge relevant to multiple statistical and…

Machine Learning · Computer Science 2020-09-01 Michael Chertkov , Vladimir Chernyak , Yury Maximov

We propose a novel method to optimize the structure of factor graphs for graph-based inference. As an example inference task, we consider symbol detection on linear inter-symbol interference channels. The factor graph framework has the…

Information Theory · Computer Science 2023-06-02 Lukas Rapp , Luca Schmid , Andrej Rode , Laurent Schmalen

We propose the use of hyperedge replacement graph grammars for factor graphs, or factor graph grammars (FGGs) for short. FGGs generate sets of factor graphs and can describe a more general class of models than plate notation, dynamic…

Machine Learning · Computer Science 2020-10-26 David Chiang , Darcey Riley

Graph pooling has been increasingly considered for graph neural networks (GNNs) to facilitate hierarchical graph representation learning. Existing graph pooling methods commonly consist of two stages, i.e., selecting the top-ranked nodes…

Machine Learning · Computer Science 2022-04-28 Mingxing Xu , Wenrui Dai , Chenglin Li , Junni Zou , Hongkai Xiong

There is a growing need for methods which can capture uncertainties and answer queries over graph-structured data. Two common types of uncertainty are uncertainty over the attribute values of nodes and uncertainty over the existence of…

Databases · Computer Science 2013-05-31 Walaa Eldin Moustafa , Angelika Kimmig , Amol Deshpande , Lise Getoor

High-dimensional feature selection is a central problem in a variety of application domains such as machine learning, image analysis, and genomics. In this paper, we propose graph-based tests as a useful basis for feature selection. We…

Methodology · Statistics 2024-08-13 Swarnadip Ghosh , Somabha Mukherjee , Divyansh Agarwal , Yichen He , Mingzhi Song , Xuejiao Pei