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Medical entity retrieval is an integral component for understanding and communicating information across various health systems. Current approaches tend to work well on specific medical domains but generalize poorly to unseen…

Computation and Language · Computer Science 2021-05-27 Luyang Kong , Christopher Winestock , Parminder Bhatia

Extracting structured information from unstructured text is critical for many downstream NLP applications and is traditionally achieved by closed information extraction (cIE). However, existing approaches for cIE suffer from two…

Computation and Language · Computer Science 2024-04-22 Nacime Bouziani , Shubhi Tyagi , Joseph Fisher , Jens Lehmann , Andrea Pierleoni

Genes, proteins and other biological entities influence one another via causal molecular networks. Causal relationships in such networks are mediated by complex and diverse mechanisms, through latent variables, and are often specific to…

Machine Learning · Computer Science 2025-03-07 Izzy Newsham , Luka Kovačević , Richard Moulange , Nan Rosemary Ke , Sach Mukherjee

The rising prevalence of eye diseases poses a growing public health burden. Large language models (LLMs) offer a promising path to reduce documentation workload and support clinical decision-making. However, few have been tailored for…

The task of triplet extraction aims to extract pairs of entities and their corresponding relations from unstructured text. Most existing methods train an extraction model on training data involving specific target relations, and are…

Computation and Language · Computer Science 2023-09-21 Bosung Kim , Hayate Iso , Nikita Bhutani , Estevam Hruschka , Ndapa Nakashole , Tom Mitchell

Large, high-quality annotated corpora remain scarce in document-level entity and relation extraction in zero-shot or few-shot settings. In this paper, we present a fully automatic, LLM-based pipeline for synthetic data generation and…

Computation and Language · Computer Science 2025-07-09 Nicholas Popovič , Ashish Kangen , Tim Schopf , Michael Färber

Recently, Large Language Models (LLMs) have gained significant traction in medical domain, especially in developing a QA systems to Medical QA systems for enhancing access to healthcare in low-resourced settings. This paper compares five…

Computation and Language · Computer Science 2026-02-17 Shefayat E Shams Adib , Ahmed Alfey Sani , Ekramul Alam Esham , Ajwad Abrar , Tareque Mohmud Chowdhury

Open Relation Extraction (OpenRE) seeks to identify and extract novel relational facts between named entities from unlabeled data without pre-defined relation schemas. Traditional OpenRE methods typically assume that the unlabeled data…

Computation and Language · Computer Science 2025-05-30 Qing Wang , Yuepei Li , Qiao Qiao , Kang Zhou , Qi Li

Relation Extraction (RE) is a fundamental task in Natural Language Processing, and its document-level variant poses significant challenges, due to complex interactions between entities across sentences. While supervised models have achieved…

Computation and Language · Computer Science 2025-10-08 Robin Armingaud , Romaric Besançon

Relation Extraction (RE) is a pivotal task in automatically extracting structured information from unstructured text. In this paper, we present a multi-faceted approach that integrates representative examples and through co-set expansion.…

Computation and Language · Computer Science 2023-08-24 Yerong Li , Roxana Girju

Automatic Term Extraction (ATE) is a critical component in downstream NLP tasks such as document tagging, ontology construction and patent analysis. Current state-of-the-art methods require expensive human annotation and struggle with…

Information Retrieval · Computer Science 2025-10-09 Elena Senger , Yuri Campbell , Rob van der Goot , Barbara Plank

Contextual Relation Extraction (CRE) is mainly used for constructing a knowledge graph with a help of ontology. It performs various tasks such as semantic search, query answering, and textual entailment. Relation extraction identifies the…

Computation and Language · Computer Science 2023-09-14 R. Priyadharshini , G. Jeyakodi , P. Shanthi Bala

Relation Extraction (RE) refers to extracting the relation triples in the input text. Existing neural work based systems for RE rely heavily on manually labeled training data, but there are still a lot of domains where sufficient labeled…

Computation and Language · Computer Science 2022-08-18 Xukun Luo , Ping Wang

Unsupervised Relation Extraction (RE) aims to identify relations between entities in text, without having access to labeled data during training. This setting is particularly relevant for domain specific RE where no annotated dataset is…

Computation and Language · Computer Science 2023-04-05 Pierre-Yves Genest , Pierre-Edouard Portier , Elöd Egyed-Zsigmond , Laurent-Walter Goix

Extracting structured information from zeolite synthesis experimental procedures is critical for materials discovery, yet existing methods have not systematically evaluated Large Language Models (LLMs) for this domain-specific task. This…

Computation and Language · Computer Science 2025-12-18 Charan Prakash Rathore , Saumi Ray , Dhruv Kumar

Extracting fine-grained experimental findings from literature can provide dramatic utility for scientific applications. Prior work has developed annotation schemas and datasets for limited aspects of this problem, failing to capture the…

Computation and Language · Computer Science 2024-04-26 Aakanksha Naik , Bailey Kuehl , Erin Bransom , Doug Downey , Tom Hope

Scaling language models have revolutionized widespread NLP tasks, yet little comprehensively explored few-shot relation extraction with large language models. In this paper, we investigate principal methodologies, in-context learning and…

Computation and Language · Computer Science 2023-06-12 Xin Xu , Yuqi Zhu , Xiaohan Wang , Ningyu Zhang

Joint entity-relation extraction (JERE) identifies both entities and their relationships simultaneously. Traditional machine-learning based approaches to performing this task require a large corpus of annotated data and lack the ability to…

Artificial Intelligence · Computer Science 2026-01-09 Trang Tran , Trung Hoang Le , Huiping Cao , Tran Cao Son

Advances in Large Language Models (LLMs) have led to significant interest in their potential to support human experts across a range of domains, including public health. In this work we present automated evaluations of LLMs for public…

The scientific literature is growing rapidly, making it hard to keep track of the state-of-the-art. Systematic literature reviews (SLRs) aim to identify and evaluate all relevant papers on a topic. After retrieving a set of candidate…

Computation and Language · Computer Science 2025-06-09 Christian Jaumann , Andreas Wiedholz , Annemarie Friedrich