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The remarkable capability of large language models (LLMs) has led to the wide application of LLM-based agents in various domains. To standardize interactions between LLM-based agents and their environments, model context protocol (MCP)…

Cryptography and Security · Computer Science 2025-09-26 Ping He , Changjiang Li , Binbin Zhao , Tianyu Du , Shouling Ji

Bioinformatics web servers are critical resources in modern biomedical research, facilitating interactive exploration of datasets through custom-built interfaces with rich visualization capabilities. However, this human-centric design…

Other Quantitative Biology · Quantitative Biology 2026-02-25 Matthias Flotho , Ian Ferenc Diks , Philipp Flotho , Leidy-Alejandra G. Molano , Pascal Hirsch , Andreas Keller

Large Language Models (LLMs) are increasingly equipped with capabilities of real-time web search and integrated with protocols like Model Context Protocol (MCP). This extension could introduce new security vulnerabilities. We present a…

Cryptography and Security · Computer Science 2025-05-23 Junjie Xiong , Changjia Zhu , Shuhang Lin , Chong Zhang , Yongfeng Zhang , Yao Liu , Lingyao Li

Artificial intelligence is rapidly evolving towards multi-agent systems where numerous AI agents collaborate and interact with external tools. Two key open standards, Google's Agent to Agent (A2A) protocol for inter-agent communication and…

Multiagent Systems · Computer Science 2025-05-08 Qiaomu Li , Ying Xie

The rapid expansion of the model context protocol (MCP) ecosystem enables large language model (LLM)-based agents to access a wide range of external tools via a standardized interface. However, identifying appropriate MCP servers for a…

Software Engineering · Computer Science 2026-04-21 Shiyu He , Zhiman Chen , Yuqi Zhao , Neng Zhang , Ran Mo , Yutao Ma

Air quality monitoring is central to environmental sustainability and public health, yet traditional systems remain difficult for non-expert users to interpret due to complex visualizations, limited interactivity, and high deployment costs.…

Emerging Technologies · Computer Science 2026-01-21 Yu-Erh Pan , Ayesha Siddika Nipu

Modern process simulators enable detailed process design, simulation, and optimization; however, constructing and interpreting simulations is time-consuming and requires expert knowledge. This limits early exploration by inexperienced…

Chemical Physics · Physics 2026-05-22 Jingkang Liang , Niklas Groll , Gürkan Sin

The rapid development of the AI agent communication protocols, including the Model Context Protocol (MCP), Agent2Agent (A2A), Agora, and Agent Network Protocol (ANP), is reshaping how AI agents communicate with tools, services, and each…

Cryptography and Security · Computer Science 2026-04-20 Zeynab Anbiaee , Mahdi Rabbani , Mansur Mirani , Gunjan Piya , Igor Opushnyev , Ali Ghorbani , Sajjad Dadkhah

The Model Context Protocol (MCP) has become a widely adopted interface for LLM agents to invoke external tools, yet learned monitoring of MCP tool-call traffic remains underexplored. In this article, the proposed detector is presented as an…

Cryptography and Security · Computer Science 2026-05-25 Sultan Zavrak

Large Language Models (LLMs) hold immense promise for revolutionizing financial analysis and decision-making, yet their direct application is often hampered by issues of data hallucination and lack of access to real-time, verifiable…

Computational Engineering, Finance, and Science · Computer Science 2025-06-13 Yifan Zeng

The variety of data in data lakes presents significant challenges for data analytics, as data scientists must simultaneously analyze multi-modal data, including structured, semi-structured, and unstructured data. While Large Language Models…

Databases · Computer Science 2025-05-19 Chao Zhang , Shaolei Zhang , Quehuan Liu , Sibei Chen , Tong Li , Ju Fan

While powerful and well-established, tools like ParaView present a steep learning curve that discourages many potential users. This work introduces ParaView-MCP, an autonomous agent that integrates modern multimodal large language models…

Human-Computer Interaction · Computer Science 2025-05-13 Shusen Liu , Haichao Miao , Peer-Timo Bremer

The deployment of Large Language Model (LLM)-generated SQL queries in Artificial Intelligence of Things (AIoT) systems introduces critical security risks, as prompt injection attacks can manipulate LLMs into producing unauthorized queries…

Cryptography and Security · Computer Science 2026-05-08 Wonbae Kim , Hee-Kyong Yoo

The Model Context Protocol (MCP) has become a common interface for connecting large language model (LLM) agents to external tools, but its reliance on stateless, eager schema injection imposes a hidden per-turn overhead the MCP Tax or Tools…

Artificial Intelligence · Computer Science 2026-04-24 Anuj Sadani , Deepak Kumar

Human-AI collaboration faces growing challenges as AI systems increasingly outperform humans on complex tasks, while humans remain responsible for orchestration, validation, and decision oversight. To address this imbalance, we introduce…

Human-Computer Interaction · Computer Science 2026-02-16 Yuanrong Tang , Huiling Peng , Bingxi Zhao , Hengyang Ding , Hanchao Song , Tianhong Wang , Chen Zhong , Jiangtao Gong

Computational data governance aims to make the enforcement of governance policies and legal obligations more efficient and reliable. Recent advances in natural language processing and agentic AI offer ways to improve how organizations share…

Emerging Technologies · Computer Science 2026-05-12 Marco Tonnarelli , Filippo Scaramuzza , Simon Harrer , Linus W. Dietz

This paper introduces a novel framework for analyzing systemic risk in financial markets through multi-scale network dynamics using Model Context Protocol (MCP) for agent communication. We develop an integrated approach that combines…

Risk Management · Quantitative Finance 2025-07-14 Avishek Bhandari

We introduce SCP: the Science Context Protocol, an open-source standard designed to accelerate discovery by enabling a global network of autonomous scientific agents. SCP is built on two foundational pillars: (1) Unified Resource…

We present AgentOptics, an agentic AI framework for high-fidelity, autonomous optical system control built on the Model Context Protocol (MCP). AgentOptics interprets natural language tasks and executes protocol-compliant actions on…

Autonomous AI agents powered by large language models (LLMs) with structured function-calling interfaces enable real-time data retrieval, computation, and multi-step orchestration. However, the rapid growth of plugins, connectors, and…

Cryptography and Security · Computer Science 2025-12-16 Mohamed Amine Ferrag , Norbert Tihanyi , Djallel Hamouda , Leandros Maglaras , Abderrahmane Lakas , Merouane Debbah