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Weakly supervised nuclei segmentation is a critical problem for pathological image analysis and greatly benefits the community due to the significant reduction of labeling cost. Adopting point annotations, previous methods mostly rely on…

Image and Video Processing · Electrical Eng. & Systems 2022-02-14 Weizhen Liu , Qian He , Xuming He

Pathology image segmentation is crucial in computational pathology for analyzing histological features relevant to cancer diagnosis and prognosis. However, current methods face major challenges in clinical applications due to limited…

Computer Vision and Pattern Recognition · Computer Science 2025-08-20 Zhixuan Chen , Junlin Hou , Liqi Lin , Yihui Wang , Yequan Bie , Xi Wang , Yanning Zhou , Ronald Cheong Kin Chan , Hao Chen

Selecting radiology examination protocol is a repetitive, and time-consuming process. In this paper, we present a deep learning approach to automatically assign protocols to computer tomography examinations, by pre-training a…

Computation and Language · Computer Science 2021-07-08 Wilson Lau , Laura Aaltonen , Martin Gunn , Meliha Yetisgen

Assessment of the glomerular basement membrane (GBM) in transmission electron microscopy (TEM) is crucial for diagnosing chronic kidney disease (CKD). The lack of domain-independent automatic segmentation tools for the GBM necessitates an…

Computer Vision and Pattern Recognition · Computer Science 2024-06-25 Xueyu Liu , Guangze Shi , Rui Wang , Yexin Lai , Jianan Zhang , Lele Sun , Quan Yang , Yongfei Wu , MIng Li , Weixia Han , Wen Zheng

Nuclei segmentation is the cornerstone task in histology image reading, shedding light on the underlying molecular patterns and leading to disease or cancer diagnosis. Yet, it is a laborious task that requires expertise from trained…

Image and Video Processing · Electrical Eng. & Systems 2025-11-10 Vasileios Magoulianitis , Catherine A. Alexander , Jiaxin Yang , C. -C. Jay Kuo

In this paper, we introduce InstructSAM, a unified and streamlined framework designed for multi-instance segmentation under arbitrary instructions. We formulates instruction-driven instance segmentation as a set-structured query prediction…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Yuqian Yuan , Wentong Li , Zhaocheng Li , Yutong Lin , Juncheng Li , Siliang Tang , Jun Xiao , Yueting Zhuang , Wenqiao Zhang

Deep learning models have shown promising performance for cell nucleus segmentation in the field of pathology image analysis. However, training a robust model from multiple domains remains a great challenge for cell nucleus segmentation.…

Image and Video Processing · Electrical Eng. & Systems 2024-03-12 Dawei Fan , Yifan Gao , Jiaming Yu , Yanping Chen , Wencheng Li , Chuancong Lin , Kaibin Li , Changcai Yang , Riqing Chen , Lifang Wei

Deep learning-based methods are gaining traction in digital pathology, with an increasing number of publications and challenges that aim at easing the work of systematically and exhaustively analyzing tissue slides. These methods often…

Image and Video Processing · Electrical Eng. & Systems 2020-06-25 Ting-An Yen , Hung-Chun Hsu , Pushpak Pati , Maria Gabrani , Antonio Foncubierta-Rodríguez , Pau-Choo Chung

Histopathology nuclei segmentation is crucial for quantitative tissue analysis and cancer diagnosis. Although existing segmentation methods have achieved strong performance, they are often computationally heavy and show limited…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Muhammad Hassan Maqsood , Yanming Zhu , Alfred Lam , Getamesay Dagnaw , Xuefei Yin , Alan Wee-Chung Liew

Semantic segmentation requires dense pixel-level annotations, which are costly and time-consuming to acquire. To address this, we present SeSAM, a framework that uses a foundational segmentation model, i.e. Segment Anything Model (SAM),…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Anurag Das , Anna Kukleva , Xinting Hu , Yuki M. Asano , Bernt Schiele

Polyp segmentation plays a vital role in accurately locating polyps at an early stage, which holds significant clinical importance for the prevention of colorectal cancer. Various polyp segmentation methods have been developed using…

Computer Vision and Pattern Recognition · Computer Science 2023-12-04 Yiming Zhao , Tao Zhou , Yunqi Gu , Yi Zhou , Yizhe Zhang , Ye Wu , Huazhu Fu

Medical image segmentation is crucial for computer-aided diagnosis, yet privacy constraints hinder data sharing across institutions. Federated learning addresses this limitation, but existing approaches often rely on lightweight…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 Tong Wang , Xingyue Zhao , Linghao Zhuang , Haoyu Zhao , Jiayi Yin , Yuyang He , Gang Yu , Bo Lin

The recent advancements in large foundation models have driven the success of open-set image segmentation, a task focused on segmenting objects beyond predefined categories. Among various prompt types (such as points, boxes, texts, and…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Xiaoqi Wang , Clint Sebastian , Wenbin He , Liu Ren

Image segmentation plays an essential role in nuclei image analysis. Recently, the segment anything model has made a significant breakthrough in such tasks. However, the current model exists two major issues for cell segmentation: (1) the…

Image and Video Processing · Electrical Eng. & Systems 2023-08-24 Qing Xu , Wenwei Kuang , Zeyu Zhang , Xueyao Bao , Haoran Chen , Wenting Duan

Planetary science research involves analysing vast amounts of remote sensing data, which are often costly and time-consuming to annotate and process. One of the essential tasks in this field is geological mapping, which requires identifying…

Computer Vision and Pattern Recognition · Computer Science 2023-05-16 Sahib Julka , Michael Granitzer

Segment Anything Model (SAM) represents a large-scale segmentation model that enables powerful zero-shot capabilities with flexible prompts. While SAM can segment any object in zero-shot, it requires user-provided prompts for each target…

Computer Vision and Pattern Recognition · Computer Science 2025-02-04 Kosuke Sakurai , Ryotaro Shimizu , Masayuki Goto

The recent advancements in large-scale pre-training techniques have significantly enhanced the capabilities of vision foundation models, notably the Segment Anything Model (SAM), which can generate precise masks based on point and box…

Computer Vision and Pattern Recognition · Computer Science 2024-10-14 Anqi Zhang , Guangyu Gao , Jianbo Jiao , Chi Harold Liu , Yunchao Wei

The recently released Segment Anything Model (SAM) has shown powerful zero-shot segmentation capabilities through a semi-automatic annotation setup in which the user can provide a prompt in the form of clicks or bounding boxes. There is…

Computer Vision and Pattern Recognition · Computer Science 2024-06-04 Benjamin Towle , Xin Chen , Ke Zhou

The primary challenge of cross-domain few-shot segmentation (CD-FSS) is the domain disparity between the training and inference phases, which can exist in either the input data or the target classes. Previous models struggle to learn…

Computer Vision and Pattern Recognition · Computer Science 2025-01-03 Shi-Feng Peng , Guolei Sun , Yong Li , Hongsong Wang , Guo-Sen Xie

We introduce ProtoSeg, a novel model for interpretable semantic image segmentation, which constructs its predictions using similar patches from the training set. To achieve accuracy comparable to baseline methods, we adapt the mechanism of…

Computer Vision and Pattern Recognition · Computer Science 2025-06-30 Mikołaj Sacha , Dawid Rymarczyk , Łukasz Struski , Jacek Tabor , Bartosz Zieliński
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