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Despite substantial progress in healthcare applications driven by large language models (LLMs), growing concerns around data privacy, and limited resources; the small language models (SLMs) offer a scalable and clinically viable solution…

Computation and Language · Computer Science 2025-04-28 Muskan Garg , Shaina Raza , Shebuti Rayana , Xingyi Liu , Sunghwan Sohn

Accessible machine learning algorithms, software, and diagnostic tools for energy-efficient devices and systems are extremely valuable across a broad range of application domains. In scientific domains, real-time near-sensor processing can…

Scientific innovation relies on detailed workflows, which include critical steps such as analyzing literature, generating ideas, validating these ideas, interpreting results, and inspiring follow-up research. However, scientific…

Computation and Language · Computer Science 2024-06-11 Xingjian Zhang , Yutong Xie , Jin Huang , Jinge Ma , Zhaoying Pan , Qijia Liu , Ziyang Xiong , Tolga Ergen , Dongsub Shim , Honglak Lee , Qiaozhu Mei

As the amount of available data continues to grow in fields as diverse as bioinformatics, physics, and remote sensing, the importance of scientific workflows in the design and implementation of reproducible data analysis pipelines…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-11 Jonathan Bader , Fabian Skalski , Fabian Lehmann , Dominik Scheinert , Jonathan Will , Lauritz Thamsen , Odej Kao

Recent advances in large language models (LLMs) have sparked growing interest in agentic workflows, which are structured sequences of LLM invocations intended to solve complex tasks. However, existing approaches often rely on static…

Artificial Intelligence · Computer Science 2025-08-12 Runchuan Zhu , Bowen Jiang , Lingrui Mei , Fangkai Yang , Lu Wang , Haoxiang Gao , Fengshuo Bai , Pu Zhao , Qingwei Lin , Saravan Rajmohan , Dongmei Zhang

Laboratory research is a complex, collaborative process that involves several stages, including hypothesis formulation, experimental design, data generation and analysis, and manuscript writing. Although reproducibility and data sharing are…

Other Quantitative Biology · Quantitative Biology 2025-02-12 Katharine Y. Chen , Maria Toro-Moreno , Arvind Rasi Subramaniam

Over the last two decades, the field of computational science has seen a dramatic shift towards incorporating high-throughput computation and big-data analysis as fundamental pillars of the scientific discovery process. This has…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-18 Martin Uhrin , Sebastiaan P. Huber , Jusong Yu , Nicola Marzari , Giovanni Pizzi

Progress in science is deeply bound to the effective use of high-performance computing infrastructures and to the efficient extraction of knowledge from vast amounts of data. Such data comes from different sources that follow a cycle…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-15 Rosa M Badia , Jorge Ejarque , Francesc Lordan , Daniele Lezzi , Javier Conejero , Javier Álvarez Cid-Fuentes , Yolanda Becerra , Anna Queralt

Scientific computing applications have benefited greatly from high performance computing infrastructure such as supercomputers. However, we are seeing a paradigm shift in the computational structure, design, and requirements of these…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-15 Prateek Sharma , Vikram Jadhao

Background. The rapid and growing popularity of machine learning (ML) applications has led to an increasing interest in MLOps, that is, the practice of continuous integration and deployment (CI/CD) of ML-enabled systems. Aims. Since changes…

Software Engineering · Computer Science 2022-09-26 Fabio Calefato , Filippo Lanubile , Luigi Quaranta

Legal practitioners, particularly those early in their careers, face complex, high-stakes tasks that require adaptive, context-sensitive reasoning. While AI holds promise in supporting legal work, current datasets and models are narrowly…

Scientific Machine Learning (SciML) is a recently emerged research field which combines physics-based and data-driven models for the numerical approximation of differential problems. Physics-based models rely on the physical understanding…

Numerical Analysis · Mathematics 2025-04-04 Alfio Quarteroni , Paola Gervasio , Francesco Regazzoni

The rise of large language models (LLMs) has transformed healthcare by offering clinical guidance, yet their direct deployment to patients poses safety risks due to limited domain expertise. To mitigate this, we propose repositioning LLMs…

Computation and Language · Computer Science 2025-10-14 Wenya Xie , Qingying Xiao , Yu Zheng , Xidong Wang , Junying Chen , Ke Ji , Anningzhe Gao , Prayag Tiwari , Xiang Wan , Feng Jiang , Benyou Wang

Machine learning (ML) empowers biomedical systems with the capability to optimize their performance through modeling of the available data extremely well, without using strong assumptions about the modeled system. Especially in nano-scale…

This paper introduces AnalyticsGPT, an intuitive and efficient large language model (LLM)-powered workflow for scientometric question answering. This underrepresented downstream task addresses the subcategory of meta-scientific questions…

Computation and Language · Computer Science 2026-02-11 Khang Ly , Georgios Cheirmpos , Adrian Raudaschl , Christopher James , Seyed Amin Tabatabaei

Developing therapeutics is a lengthy and expensive process that requires the satisfaction of many different criteria, and AI models capable of expediting the process would be invaluable. However, the majority of current AI approaches…

Advances in bioengineering and biomedicine demand a deep understanding of the dynamic behavior of biological systems, ranging from protein pathways to complex cellular processes. Biological networks like gene regulatory networks and protein…

Biomolecules · Quantitative Biology 2023-10-31 Mayalen Etcheverry , Michael Levin , Clément Moulin-Frier , Pierre-Yves Oudeyer

Machine learning (ML) is increasingly becoming a common tool in computational chemistry. At the same time, the rapid development of ML methods requires a flexible software framework for designing custom workflows. MLatom 3 is a program…

Machine learning models deployed on edge devices have enabled numerous exciting new applications, such as humanoid robots, AR glasses, and autonomous vehicles. However, the computing resources available on these edge devices are not…

Machine Learning · Computer Science 2024-11-15 Jinjie Liu , Hang Qiu

End-to-end AutoML has attracted intensive interests from both academia and industry, which automatically searches for ML pipelines in a space induced by feature engineering, algorithm/model selection, and hyper-parameter tuning. Existing…

Machine Learning · Computer Science 2021-07-21 Yang Li , Yu Shen , Wentao Zhang , Jiawei Jiang , Bolin Ding , Yaliang Li , Jingren Zhou , Zhi Yang , Wentao Wu , Ce Zhang , Bin Cui