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In this work, we benchmark various graph-based retrieval-augmented generation (RAG) systems across a broad spectrum of query types, including OLTP-style (fact-based) and OLAP-style (thematic) queries, to address the complex demands of…

Information Retrieval · Computer Science 2025-03-06 Joyce Cahoon , Prerna Singh , Nick Litombe , Jonathan Larson , Ha Trinh , Yiwen Zhu , Andreas Mueller , Fotis Psallidas , Carlo Curino

Large language models (LLMs) often struggle with knowledge-intensive tasks due to hallucinations and outdated parametric knowledge. While Retrieval-Augmented Generation (RAG) addresses this by integrating external corpora, its effectiveness…

Computation and Language · Computer Science 2026-02-04 Su Dong , Qinggang Zhang , Yilin Xiao , Shengyuan Chen , Chuang Zhou , Xiao Huang

Document-Level Biomedical Relation Extraction (Bio-RE) aims to identify relations between biomedical entities within extensive texts, serving as a crucial subfield of biomedical text mining. Existing Bio-RE methods struggle with…

Computation and Language · Computer Science 2025-01-10 Yufei Shang , Yanrong Guo , Shijie Hao , Richang Hong

Retrieval-Augmented Generation enhances language models by retrieving external knowledge to support informed and grounded responses. However, traditional RAG methods rely on fragment-level retrieval, limiting their ability to address…

Information Retrieval · Computer Science 2026-05-05 Wenbiao Tao , Xinyuan Li , Yunshi Lan , Weining Qian

Abstracts derived from biomedical literature possess distinct domain-specific characteristics, including specialised writing styles and biomedical terminologies, which necessitate a deep understanding of the related literature. As a result,…

Computation and Language · Computer Science 2023-10-25 Chen Tang , Shun Wang , Tomas Goldsack , Chenghua Lin

Large Language Models (LLMs) exhibit remarkable capabilities but are prone to generating inaccurate or hallucinatory responses. This limitation stems from their reliance on vast pretraining datasets, making them susceptible to errors in…

Computation and Language · Computer Science 2024-04-02 Chi-Min Chan , Chunpu Xu , Ruibin Yuan , Hongyin Luo , Wei Xue , Yike Guo , Jie Fu

Retrieval-augmented generation (RAG) is a promising method for addressing some of the memory-related challenges associated with Large Language Models (LLMs). Two separate systems form the RAG pipeline, the retriever and the reader, and the…

Computation and Language · Computer Science 2024-11-13 Alexandria Leto , Cecilia Aguerrebere , Ishwar Bhati , Ted Willke , Mariano Tepper , Vy Ai Vo

Large language models (LLMs) show promise in solving scientific problems. They can help generate long-form answers for scientific questions, which are crucial for comprehensive understanding of complex phenomena that require detailed…

Computation and Language · Computer Science 2025-10-01 Haozhou Xu , Dongxia Wu , Matteo Chinazzi , Ruijia Niu , Rose Yu , Yi-An Ma

This paper addresses the need for improved precision in existing knowledge-enhanced question-answering frameworks, specifically Retrieval-Augmented Generation (RAG) methods that primarily focus on enhancing recall. We propose a multi-layer…

Artificial Intelligence · Computer Science 2025-02-24 Rubing Chen , Xulu Zhang , Jiaxin Wu , Wenqi Fan , Xiao-Yong Wei , Qing Li

Retrieval-Augmented Generation (RAG) systems for biomedical literature are typically evaluated using ranking metrics like Mean Reciprocal Rank (MRR), which measure how well the system identifies the single most relevant chunk. We argue that…

Artificial Intelligence · Computer Science 2026-03-25 Pouria Mortezaagha , Arya Rahgozar

Retrieval-Augmented Generation RAG systems enhance large language models by grounding responses in external knowledge bases, but conventional RAG architectures operate with static corpora that cannot evolve from user interactions. We…

Artificial Intelligence · Computer Science 2025-12-30 Teja Chinthala

Electronic health records (EHRs) are long, noisy, and often redundant, posing a major challenge for the clinicians who must navigate them. Large language models (LLMs) offer a promising solution for extracting and reasoning over this…

Computation and Language · Computer Science 2025-08-21 Skatje Myers , Dmitriy Dligach , Timothy A. Miller , Samantha Barr , Yanjun Gao , Matthew Churpek , Anoop Mayampurath , Majid Afshar

Large language models (LLMs) perform well in medical QA, but their effectiveness in Japanese contexts is limited due to privacy constraints that prevent the use of commercial models like GPT-4 in clinical settings. As a result, recent…

Computation and Language · Computer Science 2025-04-29 Yingjian Chen , Feiyang Li , Xingyu Song , Tianxiao Li , Zixin Xu , Xiujie Chen , Issey Sukeda , Irene Li

Existing medical RAG systems mainly leverage knowledge from medical knowledge bases, neglecting the crucial role of experiential knowledge derived from similar patient cases -- a key component of human clinical reasoning. To bridge this…

Computation and Language · Computer Science 2025-05-27 Yuxing Lu , Gecheng Fu , Wei Wu , Xukai Zhao , Sin Yee Goi , Jinzhuo Wang

Medical question-answering (QA) systems can benefit from advances in large language models (LLMs), but directly applying LLMs to the clinical domain poses challenges such as maintaining factual accuracy and avoiding hallucinations. In this…

Computation and Language · Computer Science 2025-12-08 Tasnimul Hassan , Md Faisal Karim , Haziq Jeelani , Elham Behnam , Robert Green , Fayeq Jeelani Syed

A Retrieval-Augmented Generation (RAG) model powered by a large language model (LLM) provides a faster and more cost-effective solution for adapting to new data and knowledge. It also delivers more specialized responses compared to…

Computation and Language · Computer Science 2025-01-29 Zheng Zheng , Xinyi Ni , Pengyu Hong

Short answer assessment is a vital component of science education, allowing evaluation of students' complex three-dimensional understanding. Large language models (LLMs) that possess human-like ability in linguistic tasks are increasingly…

Computation and Language · Computer Science 2025-06-05 Yucheng Chu , Peng He , Hang Li , Haoyu Han , Kaiqi Yang , Yu Xue , Tingting Li , Joseph Krajcik , Jiliang Tang

Automatic text summarization methods generate a shorter version of the input text to assist the reader in gaining a quick yet informative gist. Existing text summarization methods generally focus on a single aspect of text when selecting…

Information Retrieval · Computer Science 2021-02-22 Ensieh Davoodijam , Nasser Ghadiri , Maryam Lotfi Shahreza , Fabio Rinaldi

Recent studies in medical question answering (Medical QA) have actively explored the integration of large language models (LLMs) with biomedical knowledge graphs (KGs) to improve factual accuracy. However, most existing approaches still…

Computation and Language · Computer Science 2026-01-15 Chaerin Lee , Sohee Park , Hyunsik Na , Daseon Choi

Retrieval-Augmented Generation (RAG) has become a robust framework for enhancing Large Language Models (LLMs) with external knowledge. Recent advances in RAG have investigated graph based retrieval for intricate reasoning; however, the…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Tejas Sarnaik , Manan Shah , Ravi Hegde