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The immersed boundary (IB) method is a widely used approach to simulating fluid-structure interaction (FSI). Although explicit versions of the IB method can suffer from severe time step size restrictions, these methods remain popular…
Slender body theory facilitates computational simulations of thin fibers immersed in a viscous fluid by approximating each fiber using only the geometry of the fiber centerline curve and the line force density along it. However, it has been…
A high-order quadrature scheme is constructed for the evaluation of Laplace single and double layer potentials and their normal derivatives on smooth surfaces in three dimensions. The construction begins with a harmonic approximation of the…
This paper presents a quadrature method for evaluating layer potentials in two dimensions close to periodic boundaries, discretized using the trapezoidal rule. It is an extension of the method of singularity swap quadrature, which recently…
The method of fundamental solutions (MFS) is known to be effective for solving 3D Laplace and Stokes Dirichlet boundary value problems in the exterior of a large collection of simple smooth objects. Here we present new scalable MFS…
An efficient, accurate, and flexible numerical method is proposed for the solution of the swimming problem of one or more autophoretic particles in the purely-diffusive limit. The method relies on successive boundary element solutions of…
In this paper we consider, by means of a precise spectral analysis, the 3D Navier-Stokes equations endowed with Navier slip-with-friction boundary conditions. We study the problem in a very simple geometric situation as the region between…
This work develops an efficient and accurate optimization algorithm to study the optimal mixing problem driven by boundary control of unsteady Stokes flows, based on the theoretical foundation laid by Hu and Wu in a series of work. The…
We present an efficient implementation for running three-dimensional numerical simulations of fluid-structure interaction problems on single GPUs, based on Nvidia CUDA through Numba and Python. The incompressible flow around moving bodies…
We develop a numerical a framework to study phoretic particle dynamics in two dimensions. The particles are modeled as chemically active rigid circles, which can emit or absorb a solute into surrounding fluid. The interaction between…
We investigate the reconstruction of a turbulent flow field in the atmospheric boundary layer from a time series of lidar measurements, using Large-Eddy Simulations (LES) and a 4D-Var data assimilation algorithm. This leads to an…
Reductions of the self-consistent mean field theory model of amphiphilic molecules in solvent can lead to a singular family of functionalized Cahn-Hilliard energies. We modify these energies, mollifying the singularities to stabilize the…
We consider an open, bounded, simply connected (Lipschitz) domain in $\mathbb{R}^d$, which contains a closed polyhedral surface or polygonal contour, referred to as the interface. From this interface, forces are exerted in the normal…
We develop a novel and efficient iterative scheme for solving incompressible steady Navier-Stokes equations. The method is an adaptation of the Incremental Viscosity Splitting approximation for unsteady flows to steady equations. At each…
We consider the problem of a one dimensional elastic filament immersed in a two dimensional steady Stokes fluid. Immersed boundary problems in which a thin elastic structure interacts with a surrounding fluid are prevalent in science and…
Recently, a nonconforming surface finite element was developed to discretize 3d vector-valued compressible flow problems arising in climate modeling. In this contribution we derive an error analysis for this approach on a vector-valued…
We present an enhanced immersed interface method for simulating incompressible fluid flows in thin gaps between closely spaced immersed boundaries. This regime, common in engineered structures such as including tribological interfaces and…
We present a method for computing fluid-structure interaction problems for multi-body systems. The fluid flow equations are solved using a fractional-step method with the immersed boundary method proposed by Uhlmann [J. Comput Phys. 209…
In this paper, we construct a class of Mixed Generalized Multiscale Finite Element Methods for the approximation on a coarse grid for an elliptic problem in thin two-dimensional domains. We consider the elliptic equation with homogeneous…
The quadrature error associated with a regular quadrature rule for evaluation of a layer potential increases rapidly when the evaluation point approaches the surface and the integral becomes nearly singular. Error estimates are needed to…