English
Related papers

Related papers: Intermittent flow paths in biofilms grown in a mic…

200 papers

Shear induced drainage of a foamy yield stress fluid is investigated using MRI techniques. Whereas the yield stress of the interstitial fluid stabilizes the system at rest, a fast drainage is observed when a horizontal shear is imposed. It…

Soft Condensed Matter · Physics 2010-03-31 Julie Goyon , François Bertrand , Olivier Pitois , Guillaume Ovarlez

We study the coupling between the structural dynamics and rheological response of charged colloidal monolayers at water/oil interfaces, driven into steady shear by a microdisk rotating at a controlled angular velocity. The flow causes…

Soft Condensed Matter · Physics 2015-09-14 Ivo Buttinoni , Zachary A. Zell , Todd M. Squires , Lucio Isa

The flow of amorphous solids results from a combination of elastic deformation and local structural rearrangements, which induce non-local elastic deformations. These elements are incorporated into a mechanically-consistent mesoscopic model…

Soft Condensed Matter · Physics 2015-06-12 Alexandre Nicolas , Jean-Louis Barrat

We introduce and analyze a model for osmotically spreading biofilm colonies at solid-air interfaces that includes wetting phenomena, i.e. surface forces. The model combines a hydrodynamic description for biologically passive liquid…

Biological Physics · Physics 2017-08-23 Sarah Trinschek , Karin John , Sigolène Lecuyer , Uwe Thiele

Competition between biological species in marine environments is affected by the motion of the surrounding fluid. An effective 2D compressibility can arise, for example, from the convergence and divergence of water masses at the depth at…

Populations and Evolution · Quantitative Biology 2019-01-24 Abigail Plummer , Roberto Benzi , David R. Nelson , Federico Toschi

In this work, we study the deformation behavior of thin films of various soft glassy materials that are simultaneously subjected to two creep flow fields, rotational shear flow by applying torque and elongational flow by applying normal…

Soft Condensed Matter · Physics 2012-09-21 Asima Shaukat , Manish Kaushal , Ashutosh Sharma , Yogesh M. Joshi

We observe the emergence of a distinct, elasticity-driven flow state in a yield-stress fluid in the absence of inertia. Numerical simulations show that this elasto-plastic turbulent state is characterized by a broad spectrum of fluctuations…

The formation of bacterial biofilms on solid surfaces within a fluid starts when bacteria attach to the substrate. Understanding environmental factors affecting the attachment and the early stages of the biofilm development as well as the…

Applied Physics · Physics 2019-10-30 Sung-Ha Hong , Jean-Baptiste Gorce , Horst Punzmann , Nicolas Francois , Michael Shats , Hua Xia

We investigate crystal-growth kinetics in the presence of strong shear flow in the liquid, using molecular-dynamics simulations of a binary-alloy model. Close to the equilibrium melting point, shear flow always suppresses the growth of the…

Materials Science · Physics 2017-08-15 H. L. Peng , D. M. Herlach , Th. Voigtmann

Biofilms are bacterial aggregates encased in a self-produced polymeric matrix which attach to moist surfaces and are extremely resistant to chemicals and antibiotics. Recent experiments show that their structure is defined by the interplay…

Soft Condensed Matter · Physics 2024-01-17 Ana Carpio , Elena Cebrian , Perfecto Vidal

The flow of a simple glass forming system (a 80:20 binary Lennard-Jones mixture) through a planar channel is studied via molecular dynamics simulations. The flow is driven by an external body force similar to gravity. Previous studies show…

Soft Condensed Matter · Physics 2015-05-14 Fathollah Varnik , Dierk Raabe

Controlling the mechanical response of soft glassy materials, such as emulsions, foams, and colloidal suspensions, is key for many industrial processes. While their steady-state flow behavior is reasonably well understood, their response to…

Soft Condensed Matter · Physics 2025-08-08 Frédéric Blanc , Guillaume Ovarlez , Adam Trigui , Kirsten Martens , Romain Mari

In this work, the friction factor for steady periodically developed flow through micro-and mini-channels with periodic arrays of offset strip fins is analyzed. The friction factor is studied numerically on a unit cell of the array for…

Fluid Dynamics · Physics 2021-10-18 Arthur Vangeffelen , Geert Buckinx , Maria Rosaria Vetrano , Martine Baelmans

Droplets confined in a microfluidic channel often exhibit intriguing shapes, primarily attributable to complex hydrodynamic interactions over small scales. We show that effect of varied substrate wettability conditions may further…

Fluid Dynamics · Physics 2015-09-11 Kaustav Chaudhury , Debabrata DasGupta , Tamal Roy , Suman Chakraborty

We perform mathematical anaysis of the biofilm development process. A model describing biomass growth is proposed: It arises from coupling three parabolic nonlinear equations: a biomass equation with degenerate and singular diffusion, a…

Analysis of PDEs · Mathematics 2017-03-14 Maria Gokieli , Nobuyuki Kenmochi , Marek Niezgódka

Formation of bacterial colonies as biofilm on the surface/interface of various objects has the potential to impact not only human health and disease but also energy and environmental considerations. Biofilms can be regarded as soft…

Fluid Dynamics · Physics 2015-09-15 Pallab Barai , Aloke Kumar , Partha P. Mukherjee

Diverse processes rely on the viscous flow of polymer solutions through porous media. In many cases, the macroscopic flow resistance abruptly increases above a threshold flow rate in a porous medium---but not in bulk solution. The reason…

Fluid Dynamics · Physics 2022-06-07 Christopher A. Browne , Sujit S. Datta

Active nematics are the nonequilibrium analog of passive liquid crystals in which anisotropic units consume free energy to drive emergent behavior. Similar to liquid crystal (LC) molecules in displays, ordering and dynamics in active…

Quantitative Methods · Quantitative Biology 2022-10-10 Japinder Nijjer , Mrityunjay Kothari , Changhao Li , Thomas Henzel , Qiuting Zhang , Jung-Shen B. Tai , Shuang Zhou , Sulin Zhang , Tal Cohen , Jing Yan

We use molecular dynamics simulations to study the behavior of a compressible Lennard-Jones fluid in simple shear flow in a two-dimensional nanochannel. The system is equilibrated in the fluid phase close to the triple point at which gas,…

Soft Condensed Matter · Physics 2017-03-31 Madhu Priya , Yitzhak Rabin

Active processes drive and guide biological dynamics across scales -- from subcellular cytoskeletal remodelling, through tissue development in embryogenesis, to population-level bacterial colonies expansion. In each of these, biological…