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In grammar-based compression a string is represented by a context-free grammar, also called a straight-line program (SLP), that generates only that string. We refine a recent balancing result stating that one can transform an SLP of size…

Data Structures and Algorithms · Computer Science 2021-07-02 Moses Ganardi

A reconstruction problem of words from scattered factors asks for the minimal information, like multisets of scattered factors of a given length or the number of occurrences of scattered factors from a given set, necessary to uniquely…

Formal Languages and Automata Theory · Computer Science 2020-03-17 Pamela Fleischmann , Marie Lejeune , Florin Manea , Dirk Nowotka , Michel Rigo

Let $S$ be a string of length $n$ over an alphabet $\Sigma$ and let $Q$ be a subset of $\Sigma$ of size $q \geq 2$. The 'co-occurrence problem' is to construct a compact data structure that supports the following query: given an integer $w$…

Data Structures and Algorithms · Computer Science 2022-11-11 Philip Bille , Inge Li Gørtz , Tord Stordalen

We revisit the fundamental problem of dictionary look-up with mismatches. Given a set (dictionary) of $d$ strings of length $m$ and an integer $k$, we must preprocess it into a data structure to answer the following queries: Given a query…

Data Structures and Algorithms · Computer Science 2018-06-27 Paweł Gawrychowski , Gad M. Landau , Tatiana Starikovskaya

Given a string $w$ over a finite alphabet $\Sigma$ and an integer $K$, can $w$ be partitioned into strings of length at most $K$, such that there are no \emph{collisions}? We refer to this question as the \emph{string partition} problem and…

Computational Complexity · Computer Science 2012-04-11 Anne Condon , Ján Maňuch , Chris Thachuk

We study the classical approximate string matching problem, that is, given strings $P$ and $Q$ and an error threshold $k$, find all ending positions of substrings of $Q$ whose edit distance to $P$ is at most $k$. Let $P$ and $Q$ have…

Data Structures and Algorithms · Computer Science 2011-03-21 Philip Bille

We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…

Data Structures and Algorithms · Computer Science 2011-10-14 Philip Bille , Inge Li Goertz , Hjalte Wedel Vildhøj , David Kofoed Wind

The compressed indexing problem is to preprocess a string $S$ of length $n$ into a compressed representation that supports pattern matching queries. That is, given a string $P$ of length $m$ report all occurrences of $P$ in $S$. We present…

Data Structures and Algorithms · Computer Science 2018-04-12 Anders Roy Christiansen , Mikko Berggren Ettienne

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…

Data Structures and Algorithms · Computer Science 2016-12-07 Philip Bille , Inge Li Gørtz , Frederik Rye Skjoldjensen

A factorization $f_1, \ldots, f_m$ of a string $w$ of length $n$ is called a repetition factorization of $w$ if $f_i$ is a repetition, i.e., $f_i$ is a form of $x^kx'$, where $x$ is a non-empty string, $x'$ is a (possibly-empty) proper…

Data Structures and Algorithms · Computer Science 2024-08-09 Yuki Yonemoto , Shunsuke Inenaga

In this paper, a fully compressed pattern matching problem is studied. The compression is represented by straight-line programs (SLPs), i.e. a context-free grammars generating exactly one string; the term fully means that both the pattern…

Data Structures and Algorithms · Computer Science 2013-06-26 Artur Jeż

In this work, we consider the satisfiability problem in a logic that combines word equations over string variables denoting words of unbounded lengths, regular languages to which words belong and Presburger constraints on the length of…

Logic in Computer Science · Computer Science 2018-05-24 Quang Loc Le

In this paper we present a simple linear-time algorithm constructing a context-free grammar of size O(g log(N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this string.…

Data Structures and Algorithms · Computer Science 2013-11-08 Artur Jeż

Given a string $s$ of length $n$ over a general alphabet and an integer $k$, the problem is to decide whether $s$ is a concatenation of $k$ nonempty palindromes. Two previously known solutions for this problem work in time $O(kn)$ and…

Data Structures and Algorithms · Computer Science 2020-07-07 Mikhail Rubinchik , Arseny M. Shur

In this paper, we study a series of algorithmic problems related to the subsequences occurring in the strings of a given language, under the assumption that this language is succinctly represented by a grammar generating it, or an automaton…

Formal Languages and Automata Theory · Computer Science 2024-10-11 Szilárd Zsolt Fazekas , Tore Koß , Florin Manea , Robert Mercaş , Timo Specht

In this paper we investigate the problem of building a static data structure that represents a string s using space close to its compressed size, and allows fast access to individual characters of s. This type of structures was investigated…

Computational Complexity · Computer Science 2012-05-04 Shiteng Chen , Elad Verbin , Wei Yu

We show how to determine whether a given pattern p of length m occurs in a given text t of length n in ${\tilde O}(\sqrt{n}+\sqrt{m})$\footnote{${\tilde O}$ allows for logarithmic factors in m and $n/m$} time, with inverse polynomial…

Quantum Physics · Physics 2007-05-23 H. Ramesh , V. Vinay

A string $w$ is called a minimal absent word (MAW) for another string $T$ if $w$ does not occur (as a substring) in $T$ and any proper substring of $w$ occurs in $T$. State-of-the-art data structures for reporting the set $\mathsf{MAW}(T)$…

Data Structures and Algorithms · Computer Science 2022-04-18 Tooru Akagi , Kouta Okabe , Takuya Mieno , Yuto Nakashima , Shunsuke Inenaga

Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…

Data Structures and Algorithms · Computer Science 2016-09-01 Shouhei Fukunaga , Yoshimasa Takabatake , I Tomohiro , Hiroshi Sakamoto

We consider the problem of computing a shortest solid cover of an indeterminate string. An indeterminate string may contain non-solid symbols, each of which specifies a subset of the alphabet that could be present at the corresponding…

Data Structures and Algorithms · Computer Science 2014-12-12 Maxime Crochemore , Costas S. Iliopoulos , Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Tomasz Waleń