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Generative large language models (LLMs) can be a powerful tool for augmenting text annotation procedures, but their performance varies across annotation tasks due to prompt quality, text data idiosyncrasies, and conceptual difficulty.…

Computation and Language · Computer Science 2023-06-02 Nicholas Pangakis , Samuel Wolken , Neil Fasching

AI predictive systems are increasingly embedded in decision making pipelines, shaping high stakes choices once made solely by humans. Yet robust decisions under uncertainty still rely on capabilities that current AI lacks: domain knowledge…

Artificial Intelligence · Computer Science 2025-10-28 Sima Noorani , Shayan Kiyani , George Pappas , Hamed Hassani

Generative artificial intelligence (GenAI) offers promising potential for advancing human-AI collaboration in qualitative research. However, existing works focused on conventional machine-learning and pattern-based AI systems, and little is…

A biological experiment is the most reliable way of assigning function to a protein. However, in the era of high-throughput sequencing, scientists are unable to carry out experiments to determine the function of every single gene product.…

Quantitative Methods · Quantitative Biology 2016-01-07 Iddo Friedberg , Predrag Radivojac

The increasing volume of research paper submissions poses a significant challenge to the traditional academic peer-review system, leading to an overwhelming workload for reviewers. This study explores the potential of integrating Large…

Artificial Intelligence · Computer Science 2024-12-03 Oscar Díaz , Xabier Garmendia , Juanan Pereira

In the context of text classification, the financial burden of annotation exercises for creating training data is a critical issue. Active learning techniques, particularly those rooted in uncertainty sampling, offer a cost-effective…

Computation and Language · Computer Science 2024-06-19 Hamidreza Rouzegar , Masoud Makrehchi

Chromosome analysis is vital for diagnosing genetic disorders and guiding cancer therapy decisions through the identification of somatic clonal aberrations. However, developing an AI model are hindered by the overwhelming complexity and…

Quantitative Methods · Quantitative Biology 2025-05-23 Changchun Yang , Weiqian Dai , Yilan Zhang , Siyuan Chen , Jingdong Hu , Junkai Su , Yuxuan Chen , Ao Xu , Na Li , Xin Gao , Yongguo Yu

The growing demand for AI training data has transformed data annotation into a global industry, but traditional approaches relying on human annotators are often time-consuming, labor-intensive, and prone to inconsistent quality. We propose…

Human-Computer Interaction · Computer Science 2024-09-25 Yifan Wang , David Stevens , Pranay Shah , Wenwen Jiang , Miao Liu , Xu Chen , Robert Kuo , Na Li , Boying Gong , Daniel Lee , Jiabo Hu , Ning Zhang , Bob Kamma

Artificial intelligence (AI) is reshaping modern healthcare by advancing disease diagnosis, treatment decision-making, and biomedical research. Among AI technologies, large language models (LLMs) have become especially impactful, enabling…

Artificial Intelligence · Computer Science 2025-11-18 Zhengda Wang , Daqian Shi , Jingyi Zhao , Xiaolei Diao , Xiongfeng Tang , Yanguo Qin

Accurate representation of medical information is crucial for patient safety, yet artificial intelligence (AI) systems, such as Large Language Models (LLMs), encounter challenges in error-free clinical text interpretation. This paper…

Computation and Language · Computer Science 2024-04-30 Nadia Saeed

While AI-assisted individual qualitative analysis has been substantially studied, AI-assisted collaborative qualitative analysis (CQA)-a process that involves multiple researchers working together to interpret data-remains relatively…

Human-Computer Interaction · Computer Science 2023-07-26 Jie Gao , Kenny Tsu Wei Choo , Junming Cao , Roy Ka Wei Lee , Simon Perrault

Annotated data plays a critical role in Natural Language Processing (NLP) in training models and evaluating their performance. Given recent developments in Large Language Models (LLMs), models such as ChatGPT demonstrate zero-shot…

Computation and Language · Computer Science 2024-03-18 Minzhi Li , Taiwei Shi , Caleb Ziems , Min-Yen Kan , Nancy F. Chen , Zhengyuan Liu , Diyi Yang

We deal with the problem of localized in-video taxonomic human annotation in the video content moderation domain, where the goal is to identify video segments that violate granular policies, e.g., community guidelines on an online video…

Machine Learning · Computer Science 2022-10-19 Meghana Deodhar , Xiao Ma , Yixin Cai , Alex Koes , Alex Beutel , Jilin Chen

Recent advancements in medical imaging and artificial intelligence (AI) have greatly enhanced diagnostic capabilities, but the development of effective deep learning (DL) models is still constrained by the lack of high-quality annotated…

Image and Video Processing · Electrical Eng. & Systems 2025-07-22 Amir Syahmi , Xiangrong Lu , Yinxuan Li , Haoxuan Yao , Hanjun Jiang , Ishita Acharya , Shiyi Wang , Yang Nan , Xiaodan Xing , Guang Yang

Large language models (LLMs) and retrieval-augmented generation (RAG) techniques have revolutionized traditional information access, enabling AI agent to search and summarize information on behalf of users during dynamic dialogues. Despite…

Information Retrieval · Computer Science 2024-09-04 Yunxiao Shi , Min Xu , Haimin Zhang , Xing Zi , Qiang Wu

Large language models (LLMs) are increasingly used in scientific writing but struggle with book-length tasks, often producing inconsistent structure and unreliable citations. We introduce CoAuthorAI, a human-in-the-loop writing system that…

Computation and Language · Computer Science 2026-04-23 Yangjie Tian , Xungang Gu , Yun Zhao , Jiale Yang , Lin Yang , Ning Li , He Zhang , Ruohua Xu , Hua Wang , Kewen Liao , Ming Liu

Qualitative data analysis provides insight into the underlying perceptions and experiences within unstructured data. However, the time-consuming nature of the coding process, especially for larger datasets, calls for innovative approaches,…

Human-Computer Interaction · Computer Science 2024-03-12 Elisabeth Kirsten , Annalina Buckmann , Abraham Mhaidli , Steffen Becker

The application of AI tools to the legal field feels natural: large legal document collections could be used with specialized AI to improve workflow efficiency for lawyers and ameliorate the "justice gap" for underserved clients. However,…

Computation and Language · Computer Science 2025-04-03 Allison Koenecke , Jed Stiglitz , David Mimno , Matthew Wilkens

Large Language Models (LLMs) are increasingly integrated into critical decision-making pipelines, a trend that raises the demand for robust and automated data analysis. Current approaches to dataset risk analysis are limited to manual…

Artificial Intelligence · Computer Science 2026-05-28 Panteleimon Rodis

In this paper, we conduct a critical review of existing theories and frameworks on human-human collaborative writing to assess their relevance to the current human-AI paradigm in organizational workplace settings, and draw seven insights…

Human-Computer Interaction · Computer Science 2025-09-25 Daisuke Yukita , Tim Miller , Joel Mackenzie