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The generation of protein crystals is necessary for the study of protein molecular function and structure. This is done empirically by processing large numbers of crystallization trials and inspecting them regularly in search of those with…

Computer Vision and Pattern Recognition · Computer Science 2018-05-15 Soheil Ghafurian , Peter Orth , Corey Strickland , Hua Su , Sangita Patel , Steven Soisson , Belma Dogdas

Many problems, especially those with a composite structure, can naturally be expressed in higher order logic. From a KR perspective modeling these problems in an intuitive way is a challenging task. In this paper we study the graph mining…

Logic in Computer Science · Computer Science 2016-09-01 Matthias van der Hallen , Sergey Paramonov , Michael Leuschel , Gerda Janssens

Many complex systems often contain interactions between more than two nodes, known as higher-order interactions, which can change the structure of these systems in significant ways. Researchers often assume that all interactions paint a…

Physics and Society · Physics 2024-02-16 Nicholas W. Landry , Ilya Amburg , Mirah Shi , Sinan G. Aksoy

An ordered $r$-matching is an $r$-uniform hypergraph matching equipped with an ordering on its vertices. These objects can be viewed as natural generalisations of $r$-dimensional orders. The theory of ordered 2-matchings is well-developed…

Combinatorics · Mathematics 2025-03-19 Michael Anastos , Zhihan Jin , Matthew Kwan , Benny Sudakov

We propose Subject-Conditional Relation Detection SCoRD, where conditioned on an input subject, the goal is to predict all its relations to other objects in a scene along with their locations. Based on the Open Images dataset, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2024-01-08 Ziyan Yang , Kushal Kafle , Zhe Lin , Scott Cohen , Zhihong Ding , Vicente Ordonez

Model-based learned iterative reconstruction methods have recently been shown to outperform classical reconstruction algorithms. Applicability of these methods to large scale inverse problems is however limited by the available memory for…

Image and Video Processing · Electrical Eng. & Systems 2020-04-21 Andreas Hauptmann , Jonas Adler , Simon Arridge , Ozan Öktem

Inspired by biology's most sophisticated computer, the brain, neural networks constitute a profound reformulation of computational principles. Remarkably, analogous high-dimensional, highly-interconnected computational architectures also…

Disordered Systems and Neural Networks · Physics 2024-01-23 Constantine Glen Evans , Jackson O'Brien , Erik Winfree , Arvind Murugan

An important topic of interest in imaging is the construction of protocols that are not diffraction limited. This can be achieved in a variety of ways, including classical superresolution techniques or quantum entanglement-based protocols.…

Quantum Physics · Physics 2015-10-28 Mark E. Pearce , Thomas Mehringer , J. von Zanthier , Pieter Kok

Large scale 3D scene reconstruction is important for applications such as virtual reality and simulation. Existing neural rendering approaches (e.g., NeRF, 3DGS) have achieved realistic reconstructions on large scenes, but optimize per…

Computer Vision and Pattern Recognition · Computer Science 2024-10-01 Yun Chen , Jingkang Wang , Ze Yang , Sivabalan Manivasagam , Raquel Urtasun

In real-world data, information is stored in extremely large feature vectors. These variables are typically correlated due to complex interactions involving many features simultaneously. Such correlations qualitatively correspond to…

Machine Learning · Computer Science 2025-05-22 Santiago Acevedo , Alex Rodriguez , Alessandro Laio

Image ordinal classification refers to predicting a discrete target value which carries ordering correlation among image categories. The limited size of labeled ordinal data renders modern deep learning approaches easy to overfit. To tackle…

Computer Vision and Pattern Recognition · Computer Science 2018-05-09 Chao Zhang , Ce Zhu , Jimin Xiao , Xun Xu , Yipeng Liu

Over the long history of machine learning, which dates back several decades, recurrent neural networks (RNNs) have been used mainly for sequential data and time series and generally with 1D information. Even in some rare studies on 2D…

Computer Vision and Pattern Recognition · Computer Science 2021-03-05 Nguyen Huu Phong , Bernardete Ribeiro

Grouping elements into families to analyse them separately is a standard analysis procedure in many areas of sciences. We propose herein a new algorithm based on the simple idea that members from a family look like each other, and don't…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Axel Descamps , Sélène Forget , Aliénor Lahlou , Claire Lavergne , Camille Berthelot , Guillaume Stirnemann , Rodolphe Vuilleumier , Nicolas Chéron

Temporal Graph Neural Networks (TGNNs) have gained growing attention for modeling and predicting structures in temporal graphs. However, existing TGNNs primarily focus on pairwise interactions while overlooking higher-order structures that…

Machine Learning · Computer Science 2025-05-22 Jingzhe Liu , Zhigang Hua , Yan Xie , Bingheng Li , Harry Shomer , Yu Song , Kaveh Hassani , Jiliang Tang

One of the common obstacles for learning causal models from data is that high-order conditional independence (CI) relationships between random variables are difficult to estimate. Since CI tests with conditioning sets of low order can be…

Machine Learning · Computer Science 2020-10-07 Marcel Wienöbst , Maciej Liśkiewicz

Graph Neural Networks (GNNs) have emerged as powerful tools for learning representations of graph-structured data, demonstrating remarkable performance across various tasks. Recognising their importance, there has been extensive research…

Machine Learning · Computer Science 2025-01-06 Akshit Sinha , Sreeram Vennam , Charu Sharma , Ponnurangam Kumaraguru

Network data has become widespread, larger, and more complex over the years. Traditional network data is dyadic, capturing the relations among pairs of entities. With the need to model interactions among more than two entities, significant…

Social and Information Networks · Computer Science 2025-05-30 Hao Tian , Reza Zafarani

Higher-order interactions provide a nuanced understanding of the relational structure of complex systems beyond traditional pairwise interactions. However, higher-order network analyses also incur more cumbersome interpretations and greater…

Physics and Society · Physics 2026-01-07 Alec Kirkley , Helcio Felippe , Federico Battiston

In visual recognition tasks, such as image classification, unsupervised learning exploits cheap unlabeled data and can help to solve these tasks more efficiently. We show that the recursive autoconvolution operator, adopted from physics,…

Computer Vision and Pattern Recognition · Computer Science 2017-03-28 Boris Knyazev , Erhardt Barth , Thomas Martinetz

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh