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Tumors constitute a wide family of diseases kinetically characterized by the co-presence of multiple spatio-temporal scales. So, tumor cells ecologically interplay with other kind of cells, e.g. endothelial cells or immune system effectors,…

Computational Engineering, Finance, and Science · Computer Science 2012-08-21 Giulio Caravagna , Alex Graudenzi , Marco Antoniotti , Giancarlo Mauri , Alberto d'Onofrio

Inhibiting a signalling pathway concerns controlling the cellular processes of a cancer cell's viability, cell division, and death. Assay protocols created to see if the molecular structures of the drugs being tested have the desired…

Quantitative Methods · Quantitative Biology 2022-07-19 Roumen Anguelov , G Manjunath , Avulundiah E Phiri , Trevor T Nyakudya , Priyesh Bipath , June C Serem , Yvette N Hlophe

Spatial and temporal pattern formation in reaction-diffusion systems is typically studied with two or more equations, as scalar reaction-diffusion equations confined to convex domains do not admit stable inhomogeneous states in time or…

Pattern Formation and Solitons · Physics 2026-05-07 N. Mahashri , Andrew L. Krause , M. Chandru , Thomas E. Woolley

Environmental and genetic mutations can transform the cells in a co-operating healthy tissue into an ecosystem of individualistic tumour cells that compete for space and resources. Various selection forces are responsible for driving the…

Tissues and Organs · Quantitative Biology 2008-10-28 David Basanta , Andreas Deutsch

A major goal of modern computational biology is to simulate the collective behaviour of large cell populations starting from the intricate web of molecular interactions occurring at the microscopic level. In this paper we describe a…

Biological Physics · Physics 2007-05-23 Roberto Chignola , Edoardo Milotti

The construction of a network of cell-to-cell contacts makes it possible to characterize the patterns and spatial organisation of tissues. Such networks are highly dynamic, depending on the changes of the tissue architecture caused by cell…

Tissues and Organs · Quantitative Biology 2013-06-25 Attila Csikász-Nagy , Luis M. Escudero , Martial Guillaud , Sean Sedwards , Buzz Baum , Matteo Cavaliere

In this paper we investigate some stochastic models for tumor-immune systems. To describe these models we used a Wiener process, as the noise has a stabilization effect. Their dynamics are studied in terms of stochastic stability in the…

Dynamical Systems · Mathematics 2009-06-17 O. Chis , D. Opris

We study a five-compartment mathematical model originally proposed by Kuznetsov et al. (1994) to investigate the effect of nonlinear interactions between tumour and immune cells in the tumour microenvironment, whereby immune cells may…

Tissues and Organs · Quantitative Biology 2019-09-12 Ana Osojnik , Eamonn A. Gaffney , Michael Davies , James W. T. Yates , Helen M. Byrne

We continue our study of a model for cancer treatment, constructed in Dutta et. al., 2025, by adding Virotherapy to the Chemotherapy and Immunotherapy studied there. It is a dynamical system model for the spread of cancer in healthy tissue.…

Other Quantitative Biology · Quantitative Biology 2026-03-02 Tarini Kumar Dutta , Silmera A Sangma , Janice Moore , Meir Shillor

A mathematical model of infiltrative tumour growth taking into account cell proliferation, death and motility is considered. The model is formulated in terms of local cell density and nutrient (oxygen) concentration. In the model the rate…

Tissues and Organs · Quantitative Biology 2007-05-23 A. V. Kolobov , V. V. Gubernov , A. A. Polezhaev

Simple ideas, endowed from the mathematical theory of control, are used in order to analyze in general grounds the human immune system. The general principles are minimization of the pathogen load and economy of resources. They should…

Tissues and Organs · Quantitative Biology 2016-07-12 Augusto Gonzalez

A primary goal of modern cancer research is to characterize tumour growth and evolution, to improve clinical forecasting and individualized treatment. Agent-based models support this endeavour but existing models either oversimplify spatial…

Quantitative Methods · Quantitative Biology 2023-01-20 Maciej Bak , Blair Colyer , Veselin Manojlović , Robert Noble

The move towards personalized treatment and digital twins for cancer therapy requires a complete understanding of the mathematical models upon which these optimized simulation-based strategies are formulated. This study investigates the…

Quantitative Methods · Quantitative Biology 2025-11-21 Changin Oh , Kathleen P. Wilkie

Comparing mathematical models offers a means to evaluate competing scientific theories. However, exact methods of model calibration are not applicable to many probabilistic models which simulate high-dimensional spatio-temporal data.…

Quantitative Methods · Quantitative Biology 2026-01-13 Robert A McDonald , Helen M Byrne , Heather A Harrington , Thomas Thorne , Bernadette J Stolz

We present a mathematical model of the evolutionary dynamics of a metastatic tumour under chemotherapy, comprising non-local partial differential equations for the phenotype-structured cell populations in the primary tumour and its…

Cell Behavior · Quantitative Biology 2024-06-21 Federica Padovano , Chiara Villa

Understanding how the spatial structure of blood vessel networks relates to their function in healthy and abnormal biological tissues could improve diagnosis and treatment for diseases such as cancer. New imaging techniques can generate…

Quantitative Methods · Quantitative Biology 2019-07-23 Helen M Byrne , Heather A Harrington , Ruth Muschel , Gesine Reinert , Bernadette J Stolz , Ulrike Tillmann

We consider two minimal mathematical models for cancer dynamics and self-adaptation. We aim to capture the interplay between the rapid progression of cancer growth and the possibility to leverage and enhance self-adaptive defense mechanisms…

Adaptation and Self-Organizing Systems · Physics 2025-03-27 Christian Kuehn

Cancer cells are known to modify their micro-environment such that it can sustain a larger population, or, in ecological terms, they construct a niche which increases the carrying capacity of the population. It has however been argued that…

Populations and Evolution · Quantitative Biology 2015-09-02 Philip Gerlee , Alexander R. A. Anderson

Image-based personalized medicine has the potential to transform healthcare, particularly for diseases that exhibit heterogeneous progression such as Multiple Sclerosis (MS). In this work, we introduce the first treatment-aware…

Image and Video Processing · Electrical Eng. & Systems 2025-08-12 Gian Mario Favero , Ge Ya Luo , Nima Fathi , Justin Szeto , Douglas L. Arnold , Brennan Nichyporuk , Chris Pal , Tal Arbel

While the use of combination therapy is increasing in prevalence for cancer treatment, it is often difficult to predict the exact interactions between different treatment forms, and their synergistic/antagonistic effects on patient health…

Optimization and Control · Mathematics 2021-01-29 Jayanth Pratap