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To solve many problems on graphs, graph traversals are used, the usual variants of which are the depth-first search and the breadth-first search. Implementing a graph traversal we consequently reach all vertices of the graph that belong to…

Discrete Mathematics · Computer Science 2025-02-18 A. V. Prolubnikov

The limited penetrable horizontal visibility graph algorithm was recently introduced to map time series in complex networks. We extend this visibility graph and create a directed limited penetrable horizontal visibility graph and an image…

Physics and Society · Physics 2018-05-23 Minggang Wang , Andre L. M. Vilela , Ruijin Du , Longfeng Zhao , Gaogao Dong , Lixin Tian , H. Eugene Stanley

This work presents the use of graph learning for the prediction of multi-step experimental outcomes for applications across experimental research, including material science, chemistry, and biology. The viability of geometric learning for…

Machine Learning · Computer Science 2024-08-13 Amanda A. Volk , Robert W. Epps , Jeffrey G. Ethier , Luke A. Baldwin

The problem of finding the connected components of a graph is considered. The algorithms addressed to solve the problem are used to solve such problems on graphs as problems of finding points of articulation, bridges, maximin bridge, etc. A…

Discrete Mathematics · Computer Science 2023-07-03 Alexander Prolubnikov

In a finite undirected simple graph, a {\it chordless cycle} is an induced subgraph which is a cycle. We propose two algorithms to enumerate all chordless cycles of such a graph. Compared to other similar algorithms, the proposed algorithms…

Data Structures and Algorithms · Computer Science 2014-12-01 Elisângela Silva Dias , Diane Castonguay , Humberto Longo , Walid Abdala Rfaei Jradi

Optimal linear-time algorithms for testing the planarity of a graph are well-known for over 35 years. However, these algorithms are quite involved and recent publications still try to give simpler linear-time tests. We give a simple…

Data Structures and Algorithms · Computer Science 2012-02-23 Jens M. Schmidt

The increasing complexity of computing systems places a tremendous burden on optimizing compilers, requiring ever more accurate and aggressive optimizations. Machine learning offers significant benefits for constructing optimization…

Machine Learning · Computer Science 2020-03-25 Chris Cummins , Zacharias V. Fisches , Tal Ben-Nun , Torsten Hoefler , Hugh Leather

Many computational problems admit fast algorithms on special inputs, however, the required properties might be quite restrictive. E.g., many graph problems can be solved much faster on interval or cographs, or on graphs of small…

Data Structures and Algorithms · Computer Science 2022-09-30 Stefan Kratsch , Florian Nelles

In recent years, graph prompting has emerged as a promising research direction, enabling the learning of additional tokens or subgraphs appended to the original graphs without requiring retraining of pre-trained graph models across various…

Machine Learning · Computer Science 2025-05-28 Qunzhong Wang , Xiangguo Sun , Hong Cheng

Learning a graph topology to reveal the underlying relationship between data entities plays an important role in various machine learning and data analysis tasks. Under the assumption that structured data vary smoothly over a graph, the…

Machine Learning · Statistics 2023-08-23 Xingyue Pu , Tianyue Cao , Xiaoyun Zhang , Xiaowen Dong , Siheng Chen

Over the past decade, we witness an increasing amount of interest in the design of exact exponential-time and parameterized algorithms for problems in Graph Drawing. Unfortunately, we still lack knowledge of general methods to develop such…

Data Structures and Algorithms · Computer Science 2023-10-10 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

Inferring missing links or detecting spurious ones based on observed graphs, known as link prediction, is a long-standing challenge in graph data analysis. With the recent advances in deep learning, graph neural networks have been used for…

Social and Information Networks · Computer Science 2023-01-03 Xingping Xian , Tao Wu , Xiaoke Ma , Shaojie Qiao , Yabin Shao , Chao Wang , Lin Yuan , Yu Wu

For every integer $g$, isomorphism of graphs of Euler genus at most $g$ can be decided in linear time. This improves previously known algorithms whose time complexity is $n^{O(g)}$ (shown in early 1980's), and in fact, this is the first…

Data Structures and Algorithms · Computer Science 2015-11-10 Ken-ichi Kawarabayashi

Graphs are widely used to model execution dependencies in applications. In particular, the NP-complete problem of partitioning a graph under constraints receives enormous attention by researchers because of its applicability in…

Data Structures and Algorithms · Computer Science 2017-04-04 Orlando Moreira , Merten Popp , Christian Schulz

Graphs naturally appear in several real-world contexts including social networks, the web network, and telecommunication networks. While the analysis and the understanding of graph structures have been a central area of study in algorithm…

Data Structures and Algorithms · Computer Science 2019-09-17 Gramoz Goranci

Cycles in graphs often signify interesting processes. For example, cyclic trading patterns can indicate inefficiencies or economic dependencies in trade networks, cycles in food webs can identify fragile dependencies in ecosystems, and…

Data Structures and Algorithms · Computer Science 2019-09-04 Florian Adriaens , Cigdem Aslay , Tijl De Bie , Aristides Gionis , Jefrey Lijffijt

Subsequence anomaly detection in long sequences is an important problem with applications in a wide range of domains. However, the approaches proposed so far in the literature have severe limitations: they either require prior domain…

Machine Learning · Computer Science 2022-07-26 Paul Boniol , Themis Palpanas

Existing deep learning models may encounter great challenges in handling graph structured data. In this paper, we introduce a new deep learning model for graph data specifically, namely the deep loopy neural network. Significantly different…

Machine Learning · Computer Science 2019-09-06 Jiawei Zhang

Graph learning algorithms have attained state-of-the-art performance on many graph analysis tasks such as node classification, link prediction, and clustering. It has, however, become hard to track the field's burgeoning progress. One…

Machine Learning · Computer Science 2022-04-05 Anton Tsitsulin , Benedek Rozemberczki , John Palowitch , Bryan Perozzi

We analyze the problem of discovering long cycles inside a graph. We propose and test two algorithms for this task. The first one is based on recent advances in statistical mechanics and relies on a message passing procedure. The second…

Statistical Mechanics · Physics 2007-07-03 Enzo Marinari , Guilhem Semerjian , Valery Van Kerrebroeck