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The theory of natural selection cannot describe how early life evolved, in part because acquired characteristics are passed on through horizontal exchange. It has been proposed that culture, like life, began with the emergence of…

Populations and Evolution · Quantitative Biology 2013-09-16 Liane Gabora

In a previous study, we considered an information-theoretic model of code evolution. In it, agents obtain information about their (common) environment by the perception of messages of other agents, which is determined by an interaction…

Multiagent Systems · Computer Science 2015-06-03 Andres C. Burgos , Daniel Polani

We live within an increasingly technological, information-laden environment for the first time in human evolution.This subjects us, and will continue to subject us in an accelerating fashion, to an unremitting exposure to meaningful…

Populations and Evolution · Quantitative Biology 2013-06-13 Marios Kyriazis

The Maximum Entropy Theory of Ecology (METE) is a unified theory of biodiversity that predicts a large number of macroecological patterns using only information on the species richness, total abundance, and total metabolic rate of the…

Populations and Evolution · Quantitative Biology 2015-01-23 Xiao Xiao , Daniel J. McGlinn , Ethan P. White

The main objective of explanations is to transmit knowledge to humans. This work proposes to construct informative explanations for predictions made from machine learning models. Motivated by the observations from social sciences, our…

Artificial Intelligence · Computer Science 2018-05-29 Freddy Lecue , Jiewen Wu

Living organisms survive and multiply even though they have uncertain and incomplete information about their environment and imperfect models to predict the consequences of their actions. Bayesian models have been proposed to face this…

Emerging Technologies · Computer Science 2015-11-13 Jacques Droulez , David Colliaux , Audrey Houillon , Pierre Bessière

The Extended Evolutionary Synthesis (EES) is beginning to fulfill the whole promise of Darwinian insight through its extension of evolutionary understanding from the biological domain to include cultural information evolution. Several…

Populations and Evolution · Quantitative Biology 2019-07-17 Cameron M. Smith , Liane Gabora , William Gardner-O'Kearney

Transfer entropy (TE) is a popular measure of information flow found to perform consistently well in different settings. Symbolic transfer entropy (STE) is defined similarly to TE but on the ranks of the components of the reconstructed…

Chaotic Dynamics · Physics 2010-07-05 Dimitris Kugiumtzis

This paper proposes a methodology for discovering meaningful properties in data by exploring the latent space of unsupervised deep generative models. We combine manipulation of individual latent variables to extreme values with methods…

Machine Learning · Statistics 2024-02-07 Gašper Beguš , Andrej Leban , Shane Gero

Deep neural networks for machine comprehension typically utilizes only word or character embeddings without explicitly taking advantage of structured linguistic information such as constituency trees and dependency trees. In this paper, we…

Computation and Language · Computer Science 2017-09-04 Rui Liu , Junjie Hu , Wei Wei , Zi Yang , Eric Nyberg

This study proposes Evolutionary Causal Discovery (ECD) for causal discovery that tailors response variables, predictor variables, and corresponding operators to research datasets. Utilizing genetic programming for variable relationship…

Machine Learning · Computer Science 2024-04-26 Ou Deng , Shoji Nishimura , Atsushi Ogihara , Qun Jin

Apparent biodiversity on earth exists only if we compare different species separated from their environments. Meanwhile coexisting species have to be identical in terms of energetic interactions. Consider the biosphere as a network of…

Populations and Evolution · Quantitative Biology 2007-05-23 D. Balciunas

Semantic similarity measures are a key component in natural language processing tasks such as document analysis, requirement matching, and user input interpretation. However, the performance of individual measures varies considerably across…

Computation and Language · Computer Science 2025-04-28 Jorge Martinez-Gil

In living systems, we often see the emergence of the ingredients necessary for computation -- the capacity for information transmission, storage, and modification -- begging the question of how we may exploit or imitate such biological…

Neurons and Cognition · Quantitative Biology 2020-09-11 Kristine Heiney , Gunnar Tufte , Stefano Nichele

Most of the DNA that composes a complex organism is non-coding and defined as junk. Even the coding part is composed of genes that affect the phenotype differently. Therefore, a random mutation has an effect on the specimen fitness that…

Populations and Evolution · Quantitative Biology 2021-07-19 Mattia Miotto , Lorenzo Monacelli

The behaviour of systems characterised by a closed interaction of software components with the environment is inevitably subject to perturbations and uncertainties. In this paper we propose a general framework for the specification and…

Logic in Computer Science · Computer Science 2022-04-29 Valentina Castiglioni , Michele Loreti , Simone Tini

The meaning of a sentence is a function of the relations that hold between its words. We instantiate this relational view of semantics in a series of neural models based on variants of relation networks (RNs) which represent a set of…

Computation and Language · Computer Science 2018-11-27 Lei Yu , Cyprien de Masson d'Autume , Chris Dyer , Phil Blunsom , Lingpeng Kong , Wang Ling

In this review we integrate results of long term experimental study on ant "language" and intelligence which were fully based on fundamental ideas of Information Theory, such as the Shannon entropy, the Kolmogorov complexity, and the…

Information Theory · Computer Science 2015-05-14 Boris Ryabko , Zhanna Reznikova

Persistent entropy (PE) is an information-theoretic summary statistic of persistence barcodes that has been widely used to detect regime changes in complex systems. Despite its empirical success, a general theoretical understanding of when…

Machine Learning · Statistics 2026-02-11 Matteo Rucco

Time dependence is a universal phenomenon in nature, and a variety of mathematical models in terms of dynamical systems have been developed to understand the time-dependent behavior of real-world problems. Originally constructed to analyze…

Algebraic Topology · Mathematics 2018-02-14 Zixuan Cang , Elizabeth Munch , Guo-Wei Wei