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As an emerging field, MS-based proteomics still requires software tools for efficiently storing and accessing experimental data. In this work, we focus on the management of LC-MS data, which are typically made available in standard…

Computational Engineering, Finance, and Science · Computer Science 2010-04-27 Sara Nasso , Francesco Silvestri , Francesco Tisiot , Barbara Di Camillo , Andrea Pietracaprina , Gianna Maria Toffolo

Efficient discovery of frequent itemsets in large datasets is a crucial task of data mining. In recent years, several approaches have been proposed for generating high utility patterns, they arise the problems of producing a large number of…

Databases · Computer Science 2012-12-04 B. Adinarayana Reddy , O. Srinivasa Rao , M. H. M. Krishna Prasad

Fault-tolerant distributed applications require mechanisms to recover data lost via a process failure. On modern cluster systems it is typically impractical to request replacement resources after such a failure. Therefore, applications have…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-26 Lukas Hübner , Demian Hespe , Peter Sanders , Alexandros Stamatakis

Persistent key-value (KV) stores mostly build on the Log-Structured Merge (LSM) tree for high write performance, yet the LSM-tree suffers from the inherently high I/O amplification. KV separation mitigates I/O amplification by storing only…

Databases · Computer Science 2019-06-18 Yongkun Li , Helen H. W. Chan , Patrick P. C. Lee , Yinlong Xu

As the data size in Machine Learning fields grows exponentially, it is inevitable to accelerate the computation by utilizing the ever-growing large number of available cores provided by high-performance computing hardware. However, existing…

Machine Learning · Computer Science 2021-04-23 Kun Li , Liang Yuan , Yunquan Zhang , Gongwei Chen

Log-Structured Merge-Trees (LSM-trees) dominate persistent key-value storage but suffer from high write amplification from 10x to 30x under random workloads due to repeated compaction. This overhead becomes prohibitive for large values with…

Databases · Computer Science 2026-02-05 Andrey Chursin , Lefteris Kokoris-Kogias , Alex Orlov , Alberto Sonnino , Igor Zablotchi

Key-Value Stores (KVS) based on log-structured merge-trees (LSM-trees) are widely used in storage systems but face significant challenges, such as high write amplification caused by compaction. KV-separated LSM-trees address write…

Databases · Computer Science 2025-08-20 Jianshun Zhang , Fang Wang , Jiaxin Ou , Yi Wang , Ming Zhao , Sheng Qiu , Junxun Huang , Baoquan Li , Peng Fang , Dan Feng

Hardware specialization is becoming a key enabler of energyefficient performance. Future systems will be increasingly heterogeneous, integrating multiple specialized and programmable accelerators, each with different memory demands.…

Hardware Architecture · Computer Science 2021-04-26 Johnathan Alsop , Weon Taek Na , Matthew D. Sinclair , Samuel Grayson , Sarita V. Adve

The training efficiency and scalability of language models on massive clusters currently remain a critical bottleneck. Mainstream approaches like ND parallelism are often cumbersome and complex, while flexible alternatives such as the Zero…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-24 Huawei Bai , Yifan Huang , Wenqi Shi , Ansheng You , Feifan Shao , Tengfei Han , Minghui Yu

Addressing the complexity of comprehensive information retrieval, this study introduces an innovative, iterative retrieval-augmented generation system. Our approach uniquely integrates a vector-space driven re-ranking mechanism with…

Information Theory · Computer Science 2024-01-04 Arash Shahmansoori

Work-stealing is a widely used technique for balancing irregular parallel workloads, and most modern runtime systems adopt lock-free work-stealing deques to reduce contention and improve scalability. However, existing algorithms are…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-09 Raja Sai Nandhan Yadav Kataru , Danial Davarnia , Ali Jannesari

Log-Structured-Merge (LSM) tree-based key value stores are facing critical challenges of fully leveraging the dramatic performance improvements of the underlying storage devices, which makes the compaction operations of LSM key value stores…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-08 Peng Xu , Jiguang Wan , Ping Huang , Xiaogang Yang , Chenlei Tang , Fei Wu , Changsheng Xie

This paper focuses on reducing memory usage in enumerative model checking, while maintaining the multi-core scalability obtained in earlier work. We present a tree-based multi-core compression method, which works by leveraging sharing among…

Data Structures and Algorithms · Computer Science 2011-05-17 Alfons Laarman , Jaco van de Pol , Michael Weber

SSDs are emerging storage devices which unlike HDDs, do not have mechanical parts and therefore, have superior performance compared to HDDs. Due to the high cost of SSDs, entirely replacing HDDs with SSDs is not economically justified.…

Performance · Computer Science 2018-12-12 Reza Salkhordeh , Mostafa Hadizadeh , Hossein Asadi

We present SmartExchange, an algorithm-hardware co-design framework to trade higher-cost memory storage/access for lower-cost computation, for energy-efficient inference of deep neural networks (DNNs). We develop a novel algorithm to…

Machine Learning · Computer Science 2020-05-11 Yang Zhao , Xiaohan Chen , Yue Wang , Chaojian Li , Haoran You , Yonggan Fu , Yuan Xie , Zhangyang Wang , Yingyan Lin

Storage systems account for a major portion of the total cost of ownership (TCO) of warehouse-scale computers, and thus have a major impact on the overall system's efficiency. Machine learning (ML)-based methods for solving key problems in…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-22 Chenxi Yang , Yan Li , Martin Maas , Mustafa Uysal , Ubaid Ullah Hafeez , Arif Merchant , Richard McDougall

Advanced instruments in a variety of scientific domains are collecting massive amounts of data that must be post-processed and organized to support scientific research activities. Astronomers have been pioneers in the use of databases to…

Astrophysics · Physics 2007-05-23 Y. Dora Cai , Ruth Aydt , Robert J. Brunner

We use machine learning to optimize LSM-tree structure, aiming to reduce the cost of processing various read/write operations. We introduce a new approach Camal, which boasts the following features: (1) ML-Aided: Camal is the first attempt…

Databases · Computer Science 2024-09-24 Weiping Yu , Siqiang Luo , Zihao Yu , Gao Cong

This paper presents the first implementation of a search tree data structure in an asynchronous shared-memory system that provides a wait-free algorithm for executing range queries on the tree, in addition to non-blocking algorithms for…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-15 Panagiota Fatourou , Eric Ruppert

Columnar databases are an established way to speed up online analytical processing (OLAP) queries. Nowadays, data processing (e.g., storage, visualization, and analytics) is often performed at the programming language level, hence it is…

Programming Languages · Computer Science 2023-02-21 Sebastian Kloibhofer , Lukas Makor , David Leopoldseder , Daniele Bonetta , Lukas Stadler , Hanspeter Mössenböck