Related papers: Kernels in digraphs with colored vertices
The graphlet kernel is a classical method in graph classification. It however suffers from a high computation cost due to the isomorphism test it includes. As a generic proxy, and in general at the cost of losing some information, this test…
Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is…
Biological and cellular systems are often modeled as graphs in which vertices represent objects of interest (genes, proteins, drugs) and edges represent relational ties among these objects (binds-to, interacts-with, regulates). This…
Nowadays, hyperspectral image classification widely copes with spatial information to improve accuracy. One of the most popular way to integrate such information is to extract hierarchical features from a multiscale segmentation. In the…
We study the parameterized complexity of the connected version of the vertex cover problem, where the solution set has to induce a connected subgraph. Although this problem does not admit a polynomial kernel for general graphs (unless NP is…
We consider a class of growing random graphs obtained by creating vertices sequentially one by one: at each step, we choose uniformly the neighbours of the newly created vertex; its degree is a random variable with a fixed but arbitrary…
The $P_2$-packing problem asks for whether a graph contains $k$ vertex-disjoint paths each of length two. We continue the study of its kernelization algorithms, and develop a $5k$-vertex kernel.
In this paper we consider the following three coloring concepts for digraphs. First of all, the generalized coloring concept, in which the same colored vertices of a digraph induce a subdigraph that satisfies a given digraph property.…
Given a graph and two integers $k$ and $\ell$, Partial Vertex Cover asks for a set of at most $k$ vertices whose deletion results in a graph with at most $\ell$ edges. Based on the expansion lemma, we provide a problem kernel with $(\ell +…
The study of networks has witnessed an explosive growth over the past decades with several ground-breaking methods introduced. A particularly interesting -- and prevalent in several fields of study -- problem is that of inferring a function…
In this survey, we explore recent literature on finding the cores of higher graphs using geometric and topological means. We study graphs, hypergraphs, and simplicial complexes, all of which are models of higher graphs. We study the notion…
The majority of popular graph kernels is based on the concept of Haussler's $\mathcal{R}$-convolution kernel and defines graph similarities in terms of mutual substructures. In this work, we enrich these similarity measures by considering…
We propose a new approach for defining and searching clusters in graphs that represent real technological or transaction networks. In contrast to the standard way of finding dense parts of a graph, we concentrate on the structure of edges…
A colouring of a hypergraph's vertices is polychromatic if every hyperedge contains at least one vertex of each colour; the polychromatic number is the maximum number of colours in such a colouring. Its dual, the cover-decomposition number,…
In the paper we state and prove theorem describing the upper bound on number of the graphs that have fixed number of vertices |V| and can be colored with the fixed number of n colors. The bound relates both numbers using power of 2, while…
\textsc{Edge Triangle Packing} and \textsc{Edge Triangle Covering} are dual problems extensively studied in the field of parameterized complexity. Given a graph $G$ and an integer $k$, \textsc{Edge Triangle Packing} seeks to determine…
We consider a framework for clustering edge-colored hypergraphs, where the goal is to cluster (equivalently, to color) objects based on the primary type of multiway interactions they participate in. One well-studied objective is to color…
A single coloring channel is defined by a subset of letters it allows to pass through, while deleting all others. A sequence of coloring channels provides multiple views of the same transmitted letter sequence, forming a type of…
Many real world graphs, such as the graphs of molecules, exhibit structure at multiple different scales, but most existing kernels between graphs are either purely local or purely global in character. In contrast, by building a hierarchy of…
This paper continues the study of a new variant of graph coloring with a connectivity constraint recently introduced by Hsieh et al. [COCOON 2024]. A path in a vertex-colored graph is called conflict-free if there is a color that appears…