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Quality assessment of medical images is essential for complete automation of image processing pipelines. For large population studies such as the UK Biobank, artefacts such as those caused by heart motion are problematic and manual…

Computer Vision and Pattern Recognition · Computer Science 2018-09-03 Ilkay Oksuz , Bram Ruijsink , Esther Puyol-Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Daniel Rueckert , Julia A. Schnabel , Andrew P. King

Phase-contrast magnetic resonance imaging (MRI) provides time-resolved quantification of blood flow dynamics that can aid clinical diagnosis. Long in vivo scan times due to repeated three-dimensional (3D) volume sampling over cardiac phases…

Image and Video Processing · Electrical Eng. & Systems 2020-04-22 Valery Vishnevskiy , Jonas Walheim , Sebastian Kozerke

Parallel imaging has been an essential technique to accelerate MR imaging. Nevertheless, the acceleration rate is still limited due to the ill-condition and challenges associated with the undersampled reconstruction. In this paper, we…

Image and Video Processing · Electrical Eng. & Systems 2019-08-07 Yanxia Chen , Taohui Xiao , Cheng Li , Qiegen Liu , Shanshan Wang

In ultrasound nondestructive testing, a widespread approach is to take synthetic aperture measurements from the surface of a specimen to detect and locate defects within it. Based on these measurements, imaging is usually performed using…

Signal Processing · Electrical Eng. & Systems 2020-12-09 Jan Kirchhof , Sebastian Semper , Christoph W. Wagner , Eduardo Pérez , Florian Römer , Giovanni Del Galdo

Cardiac magnetic resonance imaging (CMR) is vital for diagnosing heart diseases, but long scan time remains a major drawback. To address this, accelerated imaging techniques have been introduced by undersampling k-space, which reduces the…

Computer Vision and Pattern Recognition · Computer Science 2025-02-24 Donghang Lyu , Chinmay Rao , Marius Staring , Matthias J. P. van Osch , Mariya Doneva , Hildo J. Lamb , Nicola Pezzotti

Cardiac tagging magnetic resonance imaging (t-MRI) is the gold standard for regional myocardium deformation and cardiac strain estimation. However, this technique has not been widely used in clinical diagnosis, as a result of the difficulty…

Computer Vision and Pattern Recognition · Computer Science 2021-04-20 Meng Ye , Mikael Kanski , Dong Yang , Qi Chang , Zhennan Yan , Qiaoying Huang , Leon Axel , Dimitris Metaxas

Segmentation of cardiac magnetic resonance images (MRI) is crucial for the analysis and assessment of cardiac function, helping to diagnose and treat various cardiovascular diseases. Most recent techniques rely on deep learning and usually…

Computer Vision and Pattern Recognition · Computer Science 2025-05-08 Bruno Viti , Franz Thaler , Kathrin Lisa Kapper , Martin Urschler , Martin Holler , Elias Karabelas

Magnetic resonance imaging has been widely applied in clinical diagnosis, however, is limited by its long data acquisition time. Although imaging can be accelerated by sparse sampling and parallel imaging, achieving promising reconstruction…

Image and Video Processing · Electrical Eng. & Systems 2020-08-26 Tieyuan Lu , Xinlin Zhang , Yihui Huang , Yonggui Yang , Gang Guo , Lijun Bao , Feng Huang , Di Guo , Xiaobo Qu

Diffusion Tensor Cardiac Magnetic Resonance (DT-CMR) enables us to probe the microstructural arrangement of cardiomyocytes within the myocardium in vivo and non-invasively, which no other imaging modality allows. This innovative technology…

Image and Video Processing · Electrical Eng. & Systems 2022-06-22 Michael Tanzer , Pedro Ferreira , Andrew Scott , Zohya Khalique , Maria Dwornik , Dudley Pennell , Guang Yang , Daniel Rueckert , Sonia Nielles-Vallespin

Automated segmentation of human cardiac magnetic resonance datasets has been steadily improving during recent years. However, these methods are not directly applicable in preclinical context due to limited datasets and lower image…

Image and Video Processing · Electrical Eng. & Systems 2021-09-10 Daniel Fernandez-Llaneza , Andrea Gondova , Harris Vince , Arijit Patra , Magdalena Zurek , Peter Konings , Patrik Kagelid , Leif Hultin

High spatiotemporal resolution dynamic magnetic resonance imaging (MRI) is a powerful clinical tool for imaging moving structures as well as to reveal and quantify other physical and physiological dynamics. The low speed of MRI necessitates…

Image and Video Processing · Electrical Eng. & Systems 2019-10-14 Yuhua Chen , Jaime L. Shaw , Yibin Xie , Debiao Li , Anthony G. Christodoulou

The segmentation and classification of cardiac magnetic resonance imaging are critical for diagnosing heart conditions, yet current approaches face challenges in accuracy and generalizability. In this study, we aim to further advance the…

Image and Video Processing · Electrical Eng. & Systems 2024-12-13 Vitalii Slobodzian , Pavlo Radiuk , Oleksander Barmak , Iurii Krak

Accelerated Magnetic Resonance Imaging (MRI) requires careful optimization of k-space sampling patterns to balance acquisition speed and image quality. While recent advances in deep learning have shown promise in optimizing Cartesian…

Tissues and Organs · Quantitative Biology 2025-08-15 Ruru Xu , Ilkay Oksuz

Accurate motion estimation at high acceleration factors enables rapid motion-compensated reconstruction in Magnetic Resonance Imaging (MRI) without compromising the diagnostic image quality. In this work, we introduce an attention-aware…

Image and Video Processing · Electrical Eng. & Systems 2024-04-30 Aya Ghoul , Jiazhen Pan , Andreas Lingg , Jens Kübler , Patrick Krumm , Kerstin Hammernik , Daniel Rueckert , Sergios Gatidis , Thomas Küstner

One primary technical challenge in photoacoustic microscopy (PAM) is the necessary compromise between spatial resolution and imaging speed. In this study, we propose a novel application of deep learning principles to reconstruct…

Image and Video Processing · Electrical Eng. & Systems 2020-06-02 Anthony DiSpirito , Daiwei Li , Tri Vu , Maomao Chen , Dong Zhang , Jianwen Luo , Roarke Horstmeyer , Junjie Yao

This paper presents a deep learning method for faster magnetic resonance imaging (MRI) by reducing k-space data with sub-Nyquist sampling strategies and provides a rationale for why the proposed approach works well. Uniform subsampling is…

Machine Learning · Statistics 2019-05-14 Chang Min Hyun , Hwa Pyung Kim , Sung Min Lee , Sungchul Lee , Jin Keun Seo

Dynamic Magnetic Resonance Imaging (MRI) is a crucial non-invasive method used to capture the movement of internal organs and tissues, making it a key tool for medical diagnosis. However, dynamic MRI faces a major challenge: long…

Image and Video Processing · Electrical Eng. & Systems 2024-09-20 Tamir Shor , Chaim Baskin , Alex Bronstein

Population imaging studies rely upon good quality medical imagery before downstream image quantification. This study provides an automated approach to assess image quality from cardiovascular magnetic resonance (CMR) imaging at scale. We…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Shahabedin Nabavi , Hossein Simchi , Mohsen Ebrahimi Moghaddam , Alejandro F. Frangi , Ahmad Ali Abin

Dynamic MRI enables a range of clinical applications, including cardiac function assessment, organ motion tracking, and radiotherapy guidance. However, fully sampling the dynamic k-space data is often infeasible due to time constraints and…

Image and Video Processing · Electrical Eng. & Systems 2025-03-24 George Yiasemis , Jan-Jakob Sonke , Jonas Teuwen

Predictive high-fidelity finite element simulations of human cardiac mechanics co\-mmon\-ly require a large number of structural degrees of freedom. Additionally, these models are often coupled with lumped-parameter models of hemodynamics.…

Computational Engineering, Finance, and Science · Computer Science 2020-02-18 Martin R. Pfaller , Maria Cruz Varona , Johannes Lang , Cristóbal Bertoglio , Wolfgang A. Wall