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The tumor microenvironment (TME) plays a critical role in cancer cell proliferation, invasion, and resistance to therapy. A principal component of the TME is the tumor immune microenvironment (TIME), which includes various immune cells such…

Cell Behavior · Quantitative Biology 2024-05-30 Mobina Tousian , Christian Solis Calero , Julio Cesar Perez Sansalvador

Breast cancer is one of the most challenging global health problems among women. This study investigates the intricate breast tumor microenvironment (TME) dynamics utilizing data from Mammary-specific Polyomavirus Middle T Antigen…

Quantitative Methods · Quantitative Biology 2024-04-11 Navid Mohammad Mirzaei , Panayotis G. Kevrekidis , Leili Shahriyari

Motivation: Hepatocellular carcinoma (HCC) is a significant health problem worldwide and annual number of cases are nearly more than 700,000. However,there are few safe and effective thera-peutic options for HCC patients.Here, we propose a…

Tissues and Organs · Quantitative Biology 2017-07-05 Liang Yu , Fengdan Xu , Lin Gao

Cancer invasion of the surrounding tissue is a multiscale process that involves not only tumour cells but also other immune cells in the environment, such as the tumour-associated macrophages (TAMs). The heterogeneity of these immune cells,…

Dynamical Systems · Mathematics 2021-03-08 Szabolcs Suveges , Raluca Eftimie , Dumitru Trucu

The tumor-immune system plays a critical role in colorectal cancer progression. Recent preclinical and clinical studies showed that combination therapy with anti-PD-L1 and cancer vaccines improved treatment response. In this study, we…

Populations and Evolution · Quantitative Biology 2026-02-06 Chenghang Li , Haifeng Zhang , Xiulan Lai , Jinzhi Lei

Hepatocellular carcinoma (HCC) is the most common primary liver malignancy and is a leading cause of cancer-related death worldwide. However, cure is not possible with currently used therapies, and there is not so much approved targeted…

Genomics · Quantitative Biology 2017-07-18 Liang Yu , Fengdan Xu , Lin Gao

The interplay between tumor cells and macrophages plays a central regulatory role in cancer progression. In this study, we developed a mathematical model that incorporates tumor cells, M1 type macrophages, M2 type macrophages and an M3 type…

Populations and Evolution · Quantitative Biology 2026-03-04 Haifeng Zhang , Yipu Qu , Wuyue Yang , Chenghang Li

Understanding how microenvironmental heterogeneity influences tumor progression is essential for advancing both cancer biology and therapeutic strategies. In this study, we develop a cellular automata (CA) model to simulate tumor growth…

Cell Behavior · Quantitative Biology 2026-01-26 Yue Deng , Mingjing Li , Jinzhi Lei

Tumor microenvironment has complex effects on tumorigenesis and metastasis. However, there is still a lack of comprehensive understanding of the relationship among molecular and cellular characteristics in tumor microenvironment, clinical…

Background: Esophageal cancer poses a significant global health challenge, with the incidence of esophageal adenocarcinoma (EAC), a predominant subtype, increasing notably in Western countries. Cathepsins, a family of lysosomal proteolytic…

Tissues and Organs · Quantitative Biology 2025-04-03 Jialin Li , Shaokang Yang , Xinliang Gao , Mingbo Tang , Xiaobo Ma , Suyan Tian , Wei Liu

Chronic Hepatitis B (CHB) is an independent risk factor for hepatocellular carcinoma (HCC) initiation without cirrhosis occurrence. Apart from the favorable effects of some antiviral drugs following tumor resection on the survival of HCC…

Molecular Networks · Quantitative Biology 2023-06-29 Sedigheh Behrouzifar

A new approach to the modular, complex systems analysis of nonlinear dynamics in cell cycling network transformations involved in carcinogenesis is proposed. Carcinogenesis is a complex process that involves dynamically inter-connected…

Molecular Networks · Quantitative Biology 2007-05-23 V. I. Prisecaru , I. C. Baianu

Tumor-immune interactions are central to cancer progression and treatment outcomes. In this study, we present a stochastic agent-based model that integrates cellular heterogeneity, spatial cell-cell interactions, and drug resistance…

Tissues and Organs · Quantitative Biology 2026-05-19 Yuhong Zhang , Chenghang Li , Boya Wang , Jinzhi Lei

Circulating tumor cells (CTCs) have crucial roles in the spread of tumors during metastasis. A decisive step is the extravasation of CTCs from the blood stream or lymph system, which depends on the ability of cells to attach to vessel…

Background: Biological effects of extra-low-frequency (ELF) magnetic fields (MFs) have lacked a credible mechanism of interaction between MFs and living material. Objectives: To examine the effect of ELF-MFs on cancer cells. Methods: Five…

Tissues and Organs · Quantitative Biology 2014-04-15 Ying Li

Tumors constitute a wide family of diseases kinetically characterized by the co-presence of multiple spatio-temporal scales. So, tumor cells ecologically interplay with other kind of cells, e.g. endothelial cells or immune system effectors,…

Computational Engineering, Finance, and Science · Computer Science 2012-08-21 Giulio Caravagna , Alex Graudenzi , Marco Antoniotti , Giancarlo Mauri , Alberto d'Onofrio

Intra-tumour heterogeneity (ITH) has a strong impact on the efficacy of the immune response against solid tumours. The number of sub-populations of cancer cells expressing different antigens and the percentage of immunogenic cells (i.e.…

Cell Behavior · Quantitative Biology 2021-12-08 Emma Leschiera , Tommaso Lorenzi , Shensi Shen , Luis Almeida , Chloe Audebert

Tumors are extremely heterogeneous and comprise of a number of intratumor microenvironments or sub-regions. These tumor microenvironments may interact with eac based on complex high-level relationships, which could provide important insight…

Quantitative Methods · Quantitative Biology 2019-01-29 Vishwa S. Parekh , Michael A. Jacobs

Although the lymphatic system is clearly linked to the metastasis of most human carcinomas, the mechanisms by which lymphangiogenesis occurs in response to the presence of carcinoma remain unclear. Hierarchical models are presented to…

Applications · Statistics 2016-02-01 T. R. Fanshawe , C. M. Chapman , T. Crick

As immunotherapies become standard cancer treatments, it is increasingly important to identify a patient's immune profile, which encompasses the activity of immune cells within the tumor microenvironment and the presence of specific…

Genomics · Quantitative Biology 2026-03-31 Soham Chatterjee
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