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Related papers: Capillary-driven thinning of DNA solutions

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We show that the problem of describing the conformations of a semiflexible polymer confined to a channel can be mapped onto an exactly solvable model in the so-called extended de Gennes regime. This regime (where the polymer is neither…

Soft Condensed Matter · Physics 2014-12-23 E. Werner , B. Mehlig

Rapid progress in electrically-controlled plasmonics in solids poses a question about effects of electronic reservoirs on the properties of plasmons. We find that plasmons in electronically open systems [i.e. in (semi)conductors connected…

Mesoscale and Nanoscale Physics · Physics 2020-12-03 Kirill Kapralov , Dmitry Svintsov

Charge inversion of a DNA double helix by an oppositely charged flexible polyelectrolyte (PE) is widely used for gene delivery. It is considered here in terms of discrete charges of DNA. We concentrate on the worst scenario case when in the…

Soft Condensed Matter · Physics 2009-11-07 T. T. Nguyen , B. I. Shklovskii

Theoretical results for the extension of a polymer confined to a channel are usually derived in the limit of infinite contour length. But experimental studies and simulations of DNA molecules confined to nanochannels are not necessarily in…

Soft Condensed Matter · Physics 2015-12-23 T. St Clere Smithe , V. Iarko , A. Muralidhar , E. Werner , K. D. Dorfman , B. Mehlig

We studied the microscopic polymer conformations in the droplet detachment process of an elastic semi-dilute polyelectrolytic Xanthan solution by measuring the instantaneous birefringence. As in earlier studies, we observe the suppression…

Fluid Dynamics · Physics 2009-11-13 R. Sattler , A. Kityk , C. Wagner

This experimental, numerical, and theoretical study investigates the capillary thinning and breakup of Newtonian filaments formed following the coalescence of a millimetric-nozzle-generated pendant drop with a lower droplet cap contained in…

Fluid Dynamics · Physics 2026-05-12 Ricardo El Khoury , Kindness Isukwem , Elie Hachem , Anselmo Pereira

We study the dynamical properties of semiflexible polymers with a recently introduced bead-spring model. We focus on double-stranded DNA. The two parameters of the model, $T^*$ and $\nu$, are chosen to match its experimental force-extension…

Soft Condensed Matter · Physics 2014-11-07 Gerard T. Barkema , Debabrata Panja , J. M. J. van Leeuwen

The mechanism and driving forces of chromosome segregation in the bacterial cell cycle of E. coli is one of the least understood events in its life cycle. Using principles of entropic repulsion between polymer loops confined in a cylinder,…

Soft Condensed Matter · Physics 2021-12-24 Debarshi Mitra , Shreerang Pande , Apratim Chatterji

Electrically conducting polymers with mechanical adaptability are essential for flexible electronics, yet most suffer structural degradation under rapid deformation. In this study, multiscale coarse-grained (MSCG) simulations are used to…

Soft Condensed Matter · Physics 2025-11-03 Jingchen Wang , Tianqi Hu , Jingjie Yeo

Experiments measuring DNA extension in nanochannels are at odds with even the most basic predictions of current scaling arguments for the conformations of confined semiflexible polymers such as DNA. We show that a theory based on a weakly…

Biological Physics · Physics 2018-01-03 E. Werner , G. K. Cheong , D. Gupta , K. D. Dorfman , B. Mehlig

Capillary condensation of water is ubiquitous in nature and technology. It routinely occurs in granular and porous media, can strongly alter such properties as adhesion, lubrication, friction and corrosion, and is important in many…

Mesoscale and Nanoscale Physics · Physics 2020-12-14 Qian Yang , P. Z. Sun , L. Fumagalli , Y. V. Stebunov , S. J. Haigh , Z. W. Zhou , I. V. Grigorieva , F. C. Wang , A. K. Geim

Experimental observations and computer simulations have recently revealed universal aspects of polymer solution behaviour that were previously unknown. This progress has been made possible due to developments in experimental methodologies…

Soft Condensed Matter · Physics 2020-07-03 J. Ravi Prakash

We report measurements of turbulent drag reduction of two different polyelectrolyte solutions: DNA and hydrolyzed Polyacrylamide. Changing the salt concentration in the solutions allows us to change the flexibility of the polymer chains.…

Fluid Dynamics · Physics 2007-05-23 Christian Wagner , Yassine Amarouchene , Patrick Doyle , Daniel Bonn

Many recent studies of liquid-liquid phase separation in biology focus on phase separation as a dynamic control mechanism for cellular function, but it can also result in complex mesoscopic structures. We primarily investigate a model…

Soft Condensed Matter · Physics 2023-07-11 Sam Wilken , Aria Chaderjian , Omar A. Saleh

Despite their considerable practical and biological applications, the link between molecular properties, assembly conditions and self-organized structure in confined polymer solutions remains elusive. Here, we explore the lyotropic nematic…

Soft Condensed Matter · Physics 2023-03-21 Maxime M. C. Tortora , Daniel Jost

Structural changes in giant DNA induced by the addition of the flexible polymer PEG were examined by the method of single-DNA observation. In dilute DNA conditions, individual DNA assumes a compact state via a discrete coil-globule…

Soft Condensed Matter · Physics 2016-08-31 M. Kojima , K. Kuobo , K. Yoshikawa

We present a model for semiflexible polymers in Hamiltonian formulation which interpolates between a Rouse chain and worm-like chain. Both models are realized as limits for the parameters. The model parameters can also be chosen to match…

Soft Condensed Matter · Physics 2015-06-12 Gerard T. Barkema , J. M. J. van Leeuwen

We present a simple method for accessing the elastic properties of microscopic deformable particles. This method is based on measuring the pressure-induced deformation of soft particles as they are forced through a tapered glass…

Soft Condensed Matter · Physics 2012-09-04 Hans M. Wyss , Thomas Franke , Elisa Mele , David A. Weitz

Most single-molecule studies derive the kinetic rates of native, intermediate, and unfolded states from equilibrium hopping experiments. Here, we apply Kramers kinetic diffusive model to derive the force-dependent kinetic rates of…

Soft Condensed Matter · Physics 2022-04-13 Marc Rico-Pasto , Anna Alemany , Felix Ritort

We consider a class of kinetic models for polymeric fluids motivated by the Peterlin dumbbell theories for dilute polymer solutions with a nonlinear spring law for an infinitely extensible spring. The polymer molecules are suspended in an…

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