English
Related papers

Related papers: The imperative for reproducibility in building per…

200 papers

The vast majority of scientific contributions in the field of computational systems biology are based on mathematical models. These models can be broadly classified as either dynamic (kinetic) models or steady-state (constraint-based)…

Other Quantitative Biology · Quantitative Biology 2025-04-17 Moritz E. Beber

Reproducibility is an important requirement in evolutionary computation, where results largely depend on computational experiments. In practice, reproducibility relies on how algorithms, experimental protocols, and artifacts are documented…

Neural and Evolutionary Computing · Computer Science 2026-02-10 Francesca Da Ros , Tarik Začiragić , Aske Plaat , Thomas Bäck , Niki van Stein

Challenges to reproducibility and replicability have gained widespread attention, driven by large replication projects with lukewarm success rates. A nascent work has emerged developing algorithms to estimate the replicability of published…

Digital Libraries · Computer Science 2024-05-06 Chuhao Wu , Tatiana Chakravorti , John Carroll , Sarah Rajtmajer

Reproducibility is essential to reliable scientific discovery in high-throughput experiments. In this work we propose a unified approach to measure the reproducibility of findings identified from replicate experiments and identify putative…

Applications · Statistics 2011-10-24 Qunhua Li , James B. Brown , Haiyan Huang , Peter J. Bickel

Computational experiments have become essential for scientific discovery, allowing researchers to test hypotheses, analyze complex datasets, and validate findings. However, as computational experiments grow in scale and complexity, ensuring…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-03 Eleni Adamidi , Panayiotis Deligiannis , Nikos Foutris , Thanasis Vergoulis

This article aims to provide the information retrieval community with some reflections on recent advances in retrieval learning by analyzing the reproducibility of image-text retrieval models. Due to the increase of multimodal data over the…

Information Retrieval · Computer Science 2022-08-30 Jun Rao , Fei Wang , Liang Ding , Shuhan Qi , Yibing Zhan , Weifeng Liu , Dacheng Tao

Reproducibility is an ideal that no researcher would dispute "in the abstract", but when aspirations meet the cold hard reality of the academic grind, reproducibility often "loses out". In this essay, I share some personal experiences…

Information Retrieval · Computer Science 2022-12-29 Jimmy Lin

Reproducibility and realistic datasets are crucial for advancing research. Unfortunately, they are often neglected as valid scientific contributions in many young disciplines, with computer science being no exception. In this article, we…

Cryptography and Security · Computer Science 2019-11-19 Mikhail Fomichev , Max Maass , Matthias Hollick

Research is facing a reproducibility crisis, in which the results and findings of many studies are difficult or even impossible to reproduce. This is also the case in machine learning (ML) and artificial intelligence (AI) research. Often,…

Machine Learning · Computer Science 2023-07-21 Harald Semmelrock , Simone Kopeinik , Dieter Theiler , Tony Ross-Hellauer , Dominik Kowald

This paper reflects on a number of trends towards a more open and reproducible approach to geographic and spatial data science over recent years. In particular it considers trends towards Big Data, and the impacts this is having on spatial…

Other Statistics · Statistics 2020-08-10 Chris Brunsdon , Alexis Comber

This report synthesizes findings from the November 2024 Community Workshop on Practical Reproducibility in HPC, which convened researchers, artifact authors, reviewers, and chairs of reproducibility initiatives to address the critical…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-06 Kate Keahey , Marc Richardson , Rafael Tolosana Calasanz , Sascha Hunold , Jay Lofstead , Tanu Malik , Christian Perez

One of the foundations of science is that researchers must publish the methodology used to achieve their results so that others can attempt to reproduce them. This has the added benefit of allowing methods to be adopted and adapted for…

Databases · Computer Science 2014-06-05 Paolo Missier , Simon Woodman , Hugo Hiden , Paul Watson

Sharing artifacts -- such as trained models, pre-built indexes, and the code to use them -- aids in reproducibility efforts by allowing researchers to validate intermediate steps and improves the sustainability of research by allowing…

Information Retrieval · Computer Science 2025-05-09 Sean MacAvaney

Replicability and reproducibility (R&R) are critical for the long-term prosperity of a scientific discipline. In GIScience, researchers have discussed R&R related to different research topics and problems, such as local spatial statistics,…

Information Retrieval · Computer Science 2020-07-07 Yingjie Hu

Those seeking to reproduce a computational experiment often need to manually look at the code to see how to build necessary libraries, configure parameters, find data, and invoke the experiment; it is not automatic. Automatic…

Software Engineering · Computer Science 2023-07-24 Samuel Grayson , Reed Milewicz , Joshua Teves , Daniel S. Katz , Darko Marinov

In recent years, the research community, but also the general public, has raised serious questions about the reproducibility and replicability of scientific work. Since many studies include some kind of computational work, these issues are…

Software Engineering · Computer Science 2025-03-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

With the goal of uncovering the challenges faced by European AI students during their research endeavors, we surveyed 28 AI doctoral candidates from 13 European countries. The outcomes underscore challenges in three key areas: (1) the…

Computers and Society · Computer Science 2024-08-14 Andrea Hrckova , Jennifer Renoux , Rafael Tolosana Calasanz , Daniela Chuda , Martin Tamajka , Jakub Simko

In this paper, we replicated a Bayesian educational research project, which explores the association between broadband access and online course enrollment in the US. We summarized key findings from our replication and compared them with the…

Other Statistics · Statistics 2022-11-01 Siqi Zheng

The high-performance computing (HPC) community has adopted incentive structures to motivate reproducible research, with major conferences awarding badges to papers that meet reproducibility requirements. Yet, many papers do not meet such…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-01 Valérie Hayot-Sasson , Nathaniel Hudson , André Bauer , Maxime Gonthier , Ian Foster , Kyle Chard

With the advent of Open Science, researchers have started to publish their research artefacts (i. e., data, software, and other products of the investigations) in order to allow others to reproduce their investigations. While this…

Digital Libraries · Computer Science 2019-05-02 Max Schröder , Frank Krüger , Sascha Spors