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Many imaging techniques for biological systems -- like fixation of cells coupled with fluorescence microscopy -- provide sharp spatial resolution in reporting locations of individuals at a single moment in time but also destroy the dynamics…

Subcellular Processes · Quantitative Biology 2024-05-15 Christopher E. Miles , Scott A. McKinley , Fangyuan Ding , Richard B. Lehoucq

In this paper, we investigate a delayed reaction-diffusion-advection equation, which models the population dynamics in the advective heterogeneous environment. The existence of the nonconstant positive steady state and associated Hopf…

Dynamical Systems · Mathematics 2018-07-23 Shanshan Chen , Junjie Wei , Xue Zhang

In this paper we investigate the bifurcation structure of the triangular SKT model in the weak competition regime and of the corresponding fast-reaction system in 1D and 2D domains via numerical continuation methods. We show that the…

Analysis of PDEs · Mathematics 2019-11-06 Christian Kuehn , Cinzia Soresina

Logistic functions are good models of biological population growth. They are also popular in marketing in modelling demand-supply curves and in a different context, to chart the sales of new products over time. Delays being inherent in any…

Populations and Evolution · Quantitative Biology 2012-11-30 Milind M. Rao , K. L. Preetish

Ecologists have long investigated how demographic and movement parameters determine the spatial distribution and critical habitat size of a population. However, most models oversimplify movement behavior, neglecting how landscape…

Populations and Evolution · Quantitative Biology 2024-03-11 Vivian Dornelas , Pablo de Castro , Justin M. Calabrese , William F. Fagan , Ricardo Martinez-Garcia

In population biology, the Allee dynamics refer to negative growth rates below a critical population density. In this Letter, we study a reaction-diffusion (RD) model of population growth and dispersion in one dimension, which incorporates…

Cell Behavior · Quantitative Biology 2017-08-02 Indrani Bose , Mainak Pal , Chiranjit Karmakar

We analyze oscillatory instabilities for a coupled PDE-ODE system modeling the communication between localized spatially segregated dynamically active signaling compartments that are coupled through a passive extracellular bulk diffusion…

Pattern Formation and Solitons · Physics 2020-06-09 Sarafa A. Iyaniwura , Michael J. Ward

We study a stochastic nonlocal PDE, arising in the context of modelling spatially distributed neural activity, which is capable of sustaining stationary and moving spatially-localized ``activity bumps''. This system is known to undergo a…

Dynamical Systems · Mathematics 2009-11-11 C. R. Laing , T. A. Frewen , I. G. Kevrekidis

A one-component bistable reaction-diffusion system with asymmetric nonlocal coup ling is derived as limiting case of a two-component activator-inhibitor reaction -diffusion model with differential advection. The effects of asymmetric…

Pattern Formation and Solitons · Physics 2014-05-20 Julien Siebert , Sergio Alonso , Markus Bär , Eckehard Schöll

We study the tipping point collective dynamics of an adaptive susceptible-infected-susceptible (SIS) epidemiological network in a data-driven, machine learning-assisted manner. We identify a parameter-dependent effective stochastic…

Machine Learning · Computer Science 2023-11-14 Nikolaos Evangelou , Tianqi Cui , Juan M. Bello-Rivas , Alexei Makeev , Ioannis G. Kevrekidis

We investigate the exploration of rugged fitness landscapes by spatially structured populations with demes on the nodes of a graph, connected by migrations. In the rare migration regime, we find that finite structures can adapt more…

Populations and Evolution · Quantitative Biology 2025-02-07 Richard Servajean , Arthur Alexandre , Anne-Florence Bitbol

For a 2-D coupled PDE-ODE bulk-cell model, we investigate symmetry-breaking bifurcations that can emerge when two bulk diffusing species are coupled to two-component nonlinear intracellular reactions that are restricted to occur only within…

Pattern Formation and Solitons · Physics 2023-01-18 Merlin Pelz , Michael J. Ward

Age-structured models capture the dynamic behavior of populations over time and result in nonlinear integro-partial differential equations (IPDEs). These processes arise in various fields such as biotechnology, economics, or demography.…

Systems and Control · Electrical Eng. & Systems 2025-12-08 Carina Veil , Miroslav Krstić , Patrick McNamee , Oliver Sawodny

We study a reaction-diffusion equation with an integral term describing nonlocal consumption of resources. We show that a homogeneous equilibrium can lose its stability resulting in appearance of stationary spatial structures. It is a new…

Analysis of PDEs · Mathematics 2007-05-23 Stephane Genieys , Vitaly Volpert , Pierre Auger

In this paper, we investigate a reaction-diffusion-advection model with time delay effect. The stability/instability of the spatially nonhomogeneous positive steady state and the associated Hopf bifurcation are investigated when the given…

Dynamical Systems · Mathematics 2017-06-08 Shanshan Chen , Yuan Lou , Junjie Wei

Population-based learning paradigms, including evolutionary strategies, Population-Based Training (PBT), and recent model-merging methods, combine fast within-model optimisation with slower population-level adaptation. Despite their…

Machine Learning · Computer Science 2026-03-26 Giacomo Borghi , Hyesung Im , Lorenzo Pareschi

We study the spatial patterns formed by a system of interacting particles where the mobility of any individual is determined by the population crowding at two different spatial scales. In this way we model the behavior of some biological…

Statistical Mechanics · Physics 2015-07-08 Ricardo Martínez-García , Clara Murgui , Emilio Hernández-García , Cristóbal López

Reaction diffusion systems are often used to study pattern formation in biological systems. However, most methods for understanding their behavior are challenging and can rarely be applied to complex systems common in biological…

Analysis of PDEs · Mathematics 2013-05-24 William R. Holmes

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus

Evolutionary competition often occurs simultaneously at multiple levels of organization, in which traits or behaviors that are costly for an individual can provide collective benefits to groups to which the individual belongs. Building off…

Populations and Evolution · Quantitative Biology 2024-11-14 Konstantinos Alexiou , Daniel B. Cooney