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Cholera, a severe gastrointestinal infection caused by the bacterium Vibrio cholerae, remains a major threat to public health with a yearly estimated global burden of 2.9 million cases. Although the majority of existing models for the…

Dynamical Systems · Mathematics 2021-05-27 Beryl Musundi

We present an epidemiological model for vector-borne diseases that includes within-host viral load and antibody dynamics using structured transport equations. By incorporating the internal dynamics into the infected and recovered host…

Analysis of PDEs · Mathematics 2026-05-26 Paulo Amorim , Maria Soledad Aronna , Debora de Oliveira Medeiros

A major contribution to the onset and development of autoimmune disease is known to come from infections. An important practical problem is identifying the precise mechanism by which the breakdown of immune tolerance as a result of immune…

Quantitative Methods · Quantitative Biology 2018-05-21 F. Fatehi Chenar , Y. N. Kyrychko , K. B. Blyuss

The time-dependent reproduction number Rt can be used to track pathogen transmission and to assess the efficacy of interventions. This quantity can be estimated by fitting renewal equation models to time series of infectious disease case…

Populations and Evolution · Quantitative Biology 2025-01-30 Ioana Bouros , Robin Thompson , David Gavaghan , Ben Lambert

Seasonal variations in the incidence of infectious diseases are a well-established phenomenon, driven by factors such as climate changes, social behaviors, and ecological interactions that influence host susceptibility and transmission…

Populations and Evolution · Quantitative Biology 2024-10-23 Mahmudul Bari Hridoy

In order to explore the impact of periodically evolving domain on the transmission of disease, we study a SIS reaction-diffusion model with logistic term on a periodically evolving domain. The basic reproduction number ${\mathcal{R}}_0$ is…

Analysis of PDEs · Mathematics 2020-11-17 Yachun Tong , Zhigui Lin

In this study, we develop and analyze a nested multi-scale model for COVID -19 disease that integrates within-host scale and between-host scale sub-models. First, the well-posedness of the multi-scale model is discussed, followed by the…

Dynamical Systems · Mathematics 2021-08-30 Bishal Chhetri , D. K. K Vamsi , Carani Sanjeevi

Our study is based on an epidemiological compartmental model, the SIRS model. In the SIRS model, each individual is in one of the states susceptible (S), infected(I) or recovered (R), depending on its state of health. In compartment R, an…

Populations and Evolution · Quantitative Biology 2023-05-10 Michael Bestehorn , Thomas M. Michelitsch

We study within-host HIV dynamics using a three--component nonlinear ordinary differential equation model for healthy CD4$^{+}$ T cells, infected CD4$^{+}$ T cells, and free virus. In addition to the baseline model without treatment, we…

Numerical Analysis · Mathematics 2025-12-16 Abdul Rab

For an eco-epidemic model with disease in the prey and periodic coefficients it is conjectured in [Xingge Niu, Tailei Zhang, Zhidong Teng, The asymptotic behavior of a nonautonomous eco-epidemic model with disease in the prey, Applied…

Dynamical Systems · Mathematics 2016-01-21 César M. Silva

We have designed a computational model of a virus spread near the outbreak threshold. Using computer simulation we studied the Susceptible - Infected - Recovered (SIR) process where in consequence of a force of habit that is manifested by…

Populations and Evolution · Quantitative Biology 2021-12-23 Jozef Černák

Healthcare-associated infections (HAIs) remain a public health problem. Previous work showed intensive care unit (ICU) population structure impacts methicillin-resistant Staphylococcus aureus (MRSA) rates. Unexplored in that work was the…

Populations and Evolution · Quantitative Biology 2019-09-27 Christopher T. Short , Matthew S. Mietchen , Eric T. Lofgren

We develop a stochastic framework for viral population dynamics at the cellular level that explicitly incorporates the replication cycle with random stage durations. The model is formulated as a structured birth-death process coupled with a…

Populations and Evolution · Quantitative Biology 2026-05-13 Seong Jun Park

Human mobility is a key factor in spatial disease dynamics and related phenomena. In computational models host mobility is typically modelled by diffusion in space or on metapolulation networks. Alternatively, an effective force of…

Physics and Society · Physics 2012-03-07 Vitaly Belik , Theo Geisel , Dirk Brockmann

The basic reproduction ratio is a crucial threshold parameter in infectious disease models. In nonlocal dispersal systems, its variational characterization is challenging due to the possible absence of a principal eigenvalue caused by…

Analysis of PDEs · Mathematics 2026-05-27 Xiandong Lin , Jiazhuo Cheng , Qiru Wang

In this paper, we propose and analyze a nonlocal cooperative reaction--diffusion system with free boundaries and drift terms, motivated by directional epidemic spread. Lacking a variational structure but requiring sharper regularity of…

Analysis of PDEs · Mathematics 2025-10-14 Soufiane Bentout , Hoang-Hung Vo

Mechanistic mathematical models of within-host viral dynamics are tools for understanding how a virus' biology and its interaction with the immune system shape the infectivity of a host. The biology of the process is encoded by the…

Applications · Statistics 2025-12-11 Dylan J. Morris , Lauren Kennedy , Andrew J. Black

Recently, Li and Zhao [5] (Bull. Math. Biol., 83(5), 43, 25 pp (2021)) proposed and studied a periodic reaction-diffusion model of Zika virus with seasonality and spatial heterogeneous structure in host and vector populations. They found…

Analysis of PDEs · Mathematics 2025-12-15 Mingxin Wang , Qianying Zhang

In this paper, we introduce a nonresident computer virus model and prove the existence of at least one positive periodic solution. The proposed model is based on a biological approach and is obtained by considering that all rates (rates…

Classical Analysis and ODEs · Mathematics 2016-10-31 Aníbal Coronel , Fernando Huancas , Manuel Pinto

The basic reproduction number ($R_0$) is a threshold parameter for disease extinction or survival in isolated populations. However no human population is fully isolated from other human or animal populations. We use compartmental models to…

Populations and Evolution · Quantitative Biology 2018-09-05 Angus McLure , Kathryn Glass