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Computational models that accurately predict the binding affinity of an input protein-chemical pair can accelerate drug discovery studies. These models are trained on available protein-chemical interaction datasets, which may contain…

Quantitative Methods · Quantitative Biology 2023-01-10 Rıza Özçelik , Alperen Bağ , Berk Atıl , Melih Barsbey , Arzucan Özgür , Elif Özkırımlı

Recent strides in interpretable machine learning (ML) research reveal that models exploit undesirable patterns in the data to make predictions, which potentially causes harms in deployment. However, it is unclear how we can fix these…

In the context of human-in-the-loop Machine Learning applications, like Decision Support Systems, interpretability approaches should provide actionable insights without making the users wait. In this paper, we propose Accelerated…

Machine Learning · Computer Science 2021-12-24 David Dandolo , Chiara Masiero , Mattia Carletti , Davide Dalle Pezze , Gian Antonio Susto

With new accelerator hardware for DNN, the computing power for AI applications has increased rapidly. However, as DNN algorithms become more complex and optimized for specific applications, latency requirements remain challenging, and it is…

Machine Learning · Computer Science 2021-05-10 Matthias Wess , Matvey Ivanov , Anvesh Nookala , Christoph Unger , Alexander Wendt , Axel Jantsch

Machine learning applications such as finance and medicine demand accurate and justifiable predictions, barring most deep learning methods from use. In response, previous work combines decision trees with deep learning, yielding models that…

Computer Vision and Pattern Recognition · Computer Science 2021-01-29 Alvin Wan , Lisa Dunlap , Daniel Ho , Jihan Yin , Scott Lee , Henry Jin , Suzanne Petryk , Sarah Adel Bargal , Joseph E. Gonzalez

In recent years, pre-trained visual-linguistic models have demonstrated tremendous potential, becoming a crucial foundational framework for numerous downstream tasks. However, the information density between text and images is not uniformly…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Mengyuan Tian , Qiyan Zhao , Yanan Wang , Da-Han Wang

Robust estimation provides essential tools for analyzing data that contain outliers, ensuring that statistical models remain reliable even in the presence of some anomalous data. While robust methods have long been available in R, users of…

Computation · Statistics 2024-11-05 Sarah Leyder , Jakob Raymaekers , Peter J. Rousseeuw , Thomas Servotte , Tim Verdonck

Recent studies have demonstrated the effectiveness of token-based methods for visual content generation. As a representative work, non-autoregressive Transformers (NATs) are able to synthesize images with decent quality in a small number of…

Computer Vision and Pattern Recognition · Computer Science 2024-09-13 Zanlin Ni , Yulin Wang , Renping Zhou , Rui Lu , Jiayi Guo , Jinyi Hu , Zhiyuan Liu , Yuan Yao , Gao Huang

Meta-learning aims to train models that can generalize to new tasks with limited labeled data by extracting shared features across diverse task datasets. Additionally, it accounts for prediction uncertainty during both training and…

Machine Learning · Computer Science 2025-03-03 Hyungi Lee , Chaeyun Jang , Dongbok Lee , Juho Lee

Designing adequate and precise neural architectures is a challenging task, often done by highly specialized personnel. AutoML is a machine learning field that aims to generate good performing models in an automated way. Spectral data such…

Machine Learning · Computer Science 2020-12-04 Habib Asseiss Neto , Ronnie C. O. Alves , Sergio V. A. Campos

Neural networks are one tool for approximating non-linear differential equations used in scientific computing tasks such as surrogate modeling, real-time predictions, and optimal control. PDE foundation models utilize neural networks to…

Machine Learning · Computer Science 2025-02-11 Elisa Negrini , Yuxuan Liu , Liu Yang , Stanley J. Osher , Hayden Schaeffer

Despite significant progress in post-hoc explanation methods for neural networks, many remain heuristic and lack provable guarantees. A key approach for obtaining explanations with provable guarantees is by identifying a cardinally-minimal…

Machine Learning · Computer Science 2026-02-20 Shahaf Bassan , Yizhak Yisrael Elboher , Tobias Ladner , Volkan Şahin , Jan Kretinsky , Matthias Althoff , Guy Katz

In this paper, we introduce si4onnx, a package for performing selective inference on deep learning models. Techniques such as CAM in XAI and reconstruction-based anomaly detection using VAE can be interpreted as methods for identifying…

Machine Learning · Computer Science 2025-01-30 Teruyuki Katsuoka , Tomohiro Shiraishi , Daiki Miwa , Shuichi Nishino , Ichiro Takeuchi

In general, deep neural network (DNN) pruning methods fall into two categories: 1) Weight-based deterministic constraints, and 2) Probabilistic frameworks. While each approach has its merits and limitations there are a set of common…

Computer Vision and Pattern Recognition · Computer Science 2021-12-21 Madan Ravi Ganesh , Dawsin Blanchard , Jason J. Corso , Salimeh Yasaei Sekeh

Motion sensors embedded in wearable and mobile devices allow for dynamic selection of sensor streams and sampling rates, enabling several applications, such as power management and data-sharing control. While deep neural networks (DNNs)…

Machine Learning · Computer Science 2021-08-13 Mohammad Malekzadeh , Richard G. Clegg , Andrea Cavallaro , Hamed Haddadi

LLM_annotate is a Python package for analyzing the personality of fiction characters with large language models. It standardizes workflows for annotating character behaviors in full texts (e.g., books and movie scripts), inferring character…

Computation and Language · Computer Science 2026-01-08 Hannes Rosenbusch

Autonomous construction of deep neural network (DNNs) is desired for data streams because it potentially offers two advantages: proper model's capacity and quick reaction to drift and shift. While the self-organizing mechanism of DNNs…

Machine Learning · Computer Science 2020-01-10 Mahardhika Pratama , Choiru Za'in , Andri Ashfahani , Yew Soon Ong , Weiping Ding

In this paper, we provide a guideline for using the Neural Network Dependability Kit (NNDK) during the development process of NN models, and show how the algorithm is applied in two image classification use cases. The case studies…

Machine Learning · Computer Science 2020-12-18 Amit Sahu , Noelia Vállez , Rosana Rodríguez-Bobada , Mohamad Alhaddad , Omar Moured , Georg Neugschwandtner

Anomaly detection is vital in many domains, such as finance, healthcare, and cybersecurity. In this paper, we propose a novel deep anomaly detection method for tabular data that leverages Non-Parametric Transformers (NPTs), a model…

Machine Learning · Computer Science 2024-05-03 Hugo Thimonier , Fabrice Popineau , Arpad Rimmel , Bich-Liên Doan

Motivated by the gap between theoretical optimal approximation rates of deep neural networks (DNNs) and the accuracy realized in practice, we seek to improve the training of DNNs. The adoption of an adaptive basis viewpoint of DNNs leads to…

Machine Learning · Computer Science 2019-12-11 Eric C. Cyr , Mamikon A. Gulian , Ravi G. Patel , Mauro Perego , Nathaniel A. Trask