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The Vision Transformer (ViT) has demonstrated remarkable performance in Self-Supervised Learning (SSL) for 3D medical image analysis. Masked AutoEncoder (MAE) for feature pre-training can further unleash the potential of ViT on various…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Jiaxin Zhuang , Linshan Wu , Qiong Wang , Peng Fei , Varut Vardhanabhuti , Lin Luo , Hao Chen

Learning meaningful and interpretable representations from high-dimensional volumetric magnetic resonance (MR) images is essential for advancing personalized medicine. While Vision Transformers (ViTs) have shown promise in handling image…

Computer Vision and Pattern Recognition · Computer Science 2024-09-13 Qingqiao Hu , Daoan Zhang , Jiebo Luo , Zhenyu Gong , Benedikt Wiestler , Jianguo Zhang , Hongwei Bran Li

Early and accurate interpretation of screening mammograms is essential for effective breast cancer detection, yet it remains a complex challenge due to subtle imaging findings and diagnostic ambiguity. Many existing AI approaches fall short…

Image and Video Processing · Electrical Eng. & Systems 2025-07-24 Yalda Zafari , Roaa Elalfy , Mohamed Mabrok , Somaya Al-Maadeed , Tamer Khattab , Essam A. Rashed

Medical images exhibit latent anatomical groupings, such as organs, tissues, and pathological regions, that standard Vision Transformers (ViTs) fail to exploit. While recent work like SBM-Transformer attempts to incorporate such structures…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Huimin Cheng , Xiaowei Yu , Shushan Wu , Luyang Fang , Chao Cao , Jing Zhang , Tianming Liu , Dajiang Zhu , Wenxuan Zhong , Ping Ma

Transformers have shown great success in medical image segmentation. However, transformers may exhibit a limited generalization ability due to the underlying single-scale self-attention (SA) mechanism. In this paper, we address this issue…

Computer Vision and Pattern Recognition · Computer Science 2023-03-30 Md Mostafijur Rahman , Radu Marculescu

Pretraining vision transformers (ViT) with attention guided masked image modeling (MIM) has shown to increase downstream accuracy for natural image analysis. Hierarchical shifted window (Swin) transformer, often used in medical image…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Jue Jiang , Aneesh Rangnekar , Chloe Min Seo Choi , Harini Veeraraghavan

Recognizing handwritten mathematical expressions (HMER) is a challenging task due to the inherent two-dimensional structure, varying symbol scales, and complex spatial relationships among symbols. In this paper, we present a self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-09-01 Shree Mitra , Ritabrata Chakraborty , Nilkanta Sahu

Masked image modeling (MIM) with transformer backbones has recently been exploited as a powerful self-supervised pre-training technique. The existing MIM methods adopt the strategy to mask random patches of the image and reconstruct the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-05 Zhaohu Xing , Lei Zhu , Lequan Yu , Zhiheng Xing , Liang Wan

Masked image modeling (MIM) is a highly effective self-supervised learning (SSL) approach to extract useful feature representations from unannotated data. Predominantly used random masking methods make SSL less effective for medical images…

Computer Vision and Pattern Recognition · Computer Science 2026-04-17 Jue Jiang , Aneesh Rangnekar , Harini Veeraraghavan

One of the common and promising deep learning approaches used for medical image segmentation is transformers, as they can capture long-range dependencies among the pixels by utilizing self-attention. Despite being successful in medical…

Computer Vision and Pattern Recognition · Computer Science 2023-11-01 Md Motiur Rahman , Shiva Shokouhmand , Smriti Bhatt , Miad Faezipour

Vision Transformer (ViT) suffers from data scarcity in semi-supervised learning (SSL). To alleviate this issue, inspired by masked autoencoder (MAE), which is a data-efficient self-supervised learner, we propose Semi-MAE, a pure ViT-based…

Computer Vision and Pattern Recognition · Computer Science 2023-01-05 Haojie Yu , Kang Zhao , Xiaoming Xu

The Transformer has shown impressive performance in automatic speech recognition. It uses the encoder-decoder structure with self-attention to learn the relationship between the high-level representation of the source inputs and embedding…

Audio and Speech Processing · Electrical Eng. & Systems 2020-09-16 Xinyuan Zhou , Grandee Lee , Emre Yılmaz , Yanhua Long , Jiaen Liang , Haizhou Li

While the Self-Attention mechanism in the Transformer model has proven to be effective in many domains, we observe that it is less effective in more diverse settings (e.g. multimodality) due to the varying granularity of each token and the…

Computer Vision and Pattern Recognition · Computer Science 2024-06-06 Wayner Barrios , SouYoung Jin

Breast cancer detection through mammography interpretation remains difficult because of the minimal nature of abnormalities that experts need to identify alongside the variable interpretations between readers. The potential of CNNs for…

Image and Video Processing · Electrical Eng. & Systems 2025-08-11 Ojonugwa Oluwafemi Ejiga Peter , Daniel Emakporuena , Bamidele Dayo Tunde , Maryam Abdulkarim , Abdullahi Bn Umar

Supervised deep learning methods have achieved considerable success in medical image analysis, owing to the availability of large-scale and well-annotated datasets. However, creating such datasets for whole slide images (WSIs) in…

Computer Vision and Pattern Recognition · Computer Science 2024-06-10 Hao Wang , Euijoon Ahn , Jinman Kim

A major limitation in applying deep learning to artificial intelligence (AI) systems is the scarcity of high-quality curated datasets. We investigate strong augmentation based self-supervised learning (SSL) techniques to address this…

Image and Video Processing · Electrical Eng. & Systems 2022-03-18 John D. Miller , Vignesh A. Arasu , Albert X. Pu , Laurie R. Margolies , Weiva Sieh , Li Shen

Integrating domain knowledge into deep learning has emerged as a promising direction for improving model interpretability, generalization, and data efficiency. In this work, we present a novel knowledge-guided ViT-based Masked Autoencoder…

Machine Learning · Computer Science 2026-02-11 Abdul Matin , Rupasree Dey , Tanjim Bin Faruk , Shrideep Pallickara , Sangmi Lee Pallickara

Medical image segmentation remains a formidable challenge due to the label scarcity. Pre-training Vision Transformer (ViT) through masked image modeling (MIM) on large-scale unlabeled medical datasets presents a promising solution,…

Computer Vision and Pattern Recognition · Computer Science 2025-02-13 Fenghe Tang , Qingsong Yao , Wenxin Ma , Chenxu Wu , Zihang Jiang , S. Kevin Zhou

Deep learning based single image super resolution (SISR) algorithms has revolutionized the overall diagnosis framework by continually improving the architectural components and training strategies associated with convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2022-03-15 Fayaz Ali Dharejo , Muhammad Zawish , Farah Deeba Yuanchun Zhou , Kapal Dev , Sunder Ali Khowaja , Nawab Muhammad Faseeh Qureshi

Hispathological image segmentation algorithms play a critical role in computer aided diagnosis technology. The development of weakly supervised segmentation algorithm alleviates the problem of medical image annotation that it is…

Computer Vision and Pattern Recognition · Computer Science 2022-05-19 Ziniu Qian , Kailu Li , Maode Lai , Eric I-Chao Chang , Bingzheng Wei , Yubo Fan , Yan Xu
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