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Single-cell technologies generate high-dimensional point clouds of cells, enabling detailed characterization of complex patient states and treatment responses. Yet each patient is represented by an irregular point cloud rather than a simple…

Machine Learning · Computer Science 2025-10-31 Tianxiang Wang , Yingtong Ke , Dhananjay Bhaskar , Smita Krishnaswamy , Alexander Cloninger

Extracting specific items from 10-K reports is challenging due to variations in document formats and item presentation. To improve over traditional rule-based approaches, this study introduces and compares two advanced item segmentation…

General Finance · Quantitative Finance 2026-04-09 Hsin-Min Lu , Yu-Tai Chien , Huan-Hsun Yen , Yen-Hsiu Chen

Domain specific large language models are increasingly used to support patient education, triage, and clinical decision making in ophthalmology, making rigorous evaluation essential to ensure safety and accuracy. This study evaluated four…

In the rapidly evolving field of financial sentiment analysis, the efficiency and accuracy of predictive models are critical due to their significant impact on financial markets. Transformer based models like BERT and large language models…

Computation and Language · Computer Science 2024-10-01 Graison Jos Thomas

Objective: This study quantifies the capabilities of GPT-3.5 and GPT-4 for clinical named entity recognition (NER) tasks and proposes task-specific prompts to improve their performance. Materials and Methods: We evaluated these models on…

Computation and Language · Computer Science 2024-01-26 Yan Hu , Qingyu Chen , Jingcheng Du , Xueqing Peng , Vipina Kuttichi Keloth , Xu Zuo , Yujia Zhou , Zehan Li , Xiaoqian Jiang , Zhiyong Lu , Kirk Roberts , Hua Xu

Big data analytics is one of the state-of-the-art tools to optimize networks and transform them from merely being a blind tube that conveys data, into a cognitive, conscious, and self-optimizing entity that can intelligently adapt according…

Networking and Internet Architecture · Computer Science 2018-12-13 Mohammed S. Hadi , Ahmed Q. Lawey , Taisir E. H. El-Gorashi , J. M. H Elmirghani

Topic modeling is frequently being used for analysing large text corpora such as news articles or social media data. BERTopic, consisting of sentence embedding, dimension reduction, clustering, and topic extraction, is the newest and…

Machine Learning · Computer Science 2024-07-12 Karla Schäfer , Jeong-Eun Choi , Inna Vogel , Martin Steinebach

Identification of key variables such as medications, diseases, relations from health records and clinical notes has a wide range of applications in the clinical domain. n2c2 2022 provided shared tasks on challenges in natural language…

Computation and Language · Computer Science 2025-07-01 Shouvon Sarker , Xishuang Dong , Lijun Qian

Passively collected behavioral health data from ubiquitous sensors holds significant promise to provide mental health professionals insights from patient's daily lives; however, developing analysis tools to use this data in clinical…

Interpreting and communicating electrocardiogram (ECG) findings are crucial yet challenging tasks in cardiovascular diagnosis, traditionally requiring significant expertise and precise clinical communication. This paper introduces…

Signal Processing · Electrical Eng. & Systems 2025-10-30 Koustav Mallick , Neel Singh , Mohammedreza Hajiarbabi

This paper proposes a medical literature summary generation method based on the BERT model to address the challenges brought by the current explosion of medical information. By fine-tuning and optimizing the BERT model, we develop an…

Computation and Language · Computer Science 2024-10-29 Jiacheng Hu , Yiru Cang , Guiran Liu , Meiqi Wang , Weijie He , Runyuan Bao

Medical triage is the task of allocating medical resources and prioritizing patients based on medical need. This paper introduces the first large-scale public dataset for studying medical triage in the context of asynchronous outpatient…

Computation and Language · Computer Science 2026-01-21 Joseph Gatto , Parker Seegmiller , Timothy Burdick , Philip Resnik , Roshnik Rahat , Sarah DeLozier , Sarah M. Preum

We introduce OTTER, a unified open-set multi-label tagging framework that harmonizes the stability of a curated, predefined category set with the adaptability of user-driven open tags. OTTER is built upon a large-scale, hierarchically…

Computer Vision and Pattern Recognition · Computer Science 2025-10-02 Jieer Ouyang , Xiaoneng Xiang , Zheng Wang , Yangkai Ding

We describe team ielab from CSIRO and The University of Queensland's approach to the 2023 TREC Clinical Trials Track. Our approach was to use neural rankers but to utilise Large Language Models to overcome the issue of lack of training data…

Information Retrieval · Computer Science 2024-01-04 Shengyao Zhuang , Bevan Koopman , Guido Zuccon

Traditional computer vision models are trained to predict a fixed set of predefined categories. Recently, natural language has been shown to be a broader and richer source of supervision that provides finer descriptions to visual concepts…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Bichen Wu , Ruizhe Cheng , Peizhao Zhang , Tianren Gao , Peter Vajda , Joseph E. Gonzalez

MITRE ATT&CK is a cybersecurity knowledge base that organizes threat actor and cyber-attack information into a set of tactics describing the reasons and goals threat actors have for carrying out attacks, with each tactic having a set of…

Health Mention Classification (HMC) plays a critical role in leveraging social media posts for real-time tracking and public health monitoring. Nevertheless, the process of HMC presents significant challenges due to its intricate nature,…

Computation and Language · Computer Science 2025-05-01 Reem Abdel-Salam , Mary Adewunmi

Automatic Speech Recognition (ASR) in medical contexts has the potential to save time, cut costs, increase report accuracy, and reduce physician burnout. However, the healthcare industry has been slower to adopt this technology, in part due…

Audio and Speech Processing · Electrical Eng. & Systems 2024-03-14 Joel Shor , Ruyue Agnes Bi , Subhashini Venugopalan , Steven Ibara , Roman Goldenberg , Ehud Rivlin

Mass casualty incidents (MCIs) pose a significant challenge to emergency medical services by overwhelming available resources and personnel. Effective victim assessment is the key to minimizing casualties during such a crisis. We introduce…

This paper proposes a knowledge-enhanced disease diagnosis method based on a prompt learning framework. The method retrieves structured knowledge from external knowledge graphs related to clinical cases, encodes it, and injects it into the…

Computation and Language · Computer Science 2024-09-17 Zhang Zheng