Related papers: On posets and polytopes attached to arbors
We recover the Tutte polynomial of a matroid, up to change of coordinates, from an Ehrhart-style polynomial counting lattice points in the Minkowski sum of its base polytope and scalings of simplices. Our polynomial has coefficients of…
In order to be able to use methods of Universal Algebra for investigating posets, we assign to every pseudocomplemented poset, to every relatively pseudocomplemented poset and to every sectionally pseudocomplemented poset a certain algebra…
A generic orthotope is an orthogonal polytope whose tangent cones are described by read-once Boolean functions. The purpose of this note is to develop a theory ofEhrhart polynomials for integral generic orthotopes. The most remarkable part…
In this short note, we give large counterexamples to natural questions about certain order polytopes, in particular, Gelfand--Tsetlin polytopes. Several of the counterexamples are too large to be discovered via a brute-force computer…
Several polytopes arise from finite graphs. For edge and symmetric edge polytopes, in particular, exhaustive computation of the Ehrhart polynomials not merely supports the conjecture of Beck {\it et al.}\ that all roots $\alpha$ of Ehrhart…
In phylogenetics, evolution is traditionally represented in a tree-like manner. However, phylogenetic networks can be more appropriate for representing evolutionary events such as hybridization, horizontal gene transfer, and others. In…
Comparative analyses of phylogenetic trees typically require identical taxon sets, however, in practice, trees often include distinct but overlapping taxa. Pruning non-shared leaves discards phylogenetic signal, whereas tree completion can…
We generalize Ehrhart's idea of counting lattice points in dilated rational polytopes: Given a rational simplex, that is, an n-dimensional polytope with n+1 rational vertices, we use its description as the intersection of n+1 halfspaces,…
Ehrhart theory is the study of the enumeration of lattice points in lattice polytopes. Equivariant Ehrhart theory is a generalization of Ehrhart theory that takes into account the action of a finite group acting via affine transformations…
Phylogenetics begins with reconstructing biological family trees from genetic data. Since Nature is not limited to tree-like histories, we use networks to organize our data, and have discovered new polytopes, metric spaces, and simplicial…
Equivariant Ehrhart theory enumerates the lattice points in a polytope with respect to a group action. Answering a question of Stapledon, we describe the equivariant Ehrhart theory of the permutahedron, and we prove his Effectiveness…
Generalized Pythagoras trees were developed for visualizing hierarchical data, producing organic, fractal-like representations. However, the drawback of the original layout algorithm is visual overlap of tree branches. To avoid such…
The coefficients of the chain polynomial of a finite poset enumerate chains in the poset by their number of elements. The chain polynomials of the partition lattices and their standard type $B$ analogues are shown to have only real roots.…
Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…
Matroids give rise to several natural constructions of polytopes. Inspired by this, we examine polytopes that arise from the signed circuits of an oriented matroid. We give the dimensions of these polytopes arising from graphical oriented…
It is known that Shintani zeta functions, which generalise multiple zeta functions, extend to meromorphic functions with poles on affine hyperplanes. We refine this result in showing that the poles lie on hyperplanes parallel to the facets…
A linear forest is a collection of vertex-disjoint paths. The Linear Arboricity Conjecture states that every graph of maximum degree $\Delta$ can be decomposed into at most $\lceil(\Delta+1)/2\rceil$ linear forests. We prove that $\Delta/2…
The h^*-polynomial of a lattice polytope is the numerator of the generating function of the Ehrhart polynomial. Let P be a lattice polytope with h^*-polynomial of degree d and with linear coefficient h^*_1. We show that P has to be a…
It is known when we call a poset P, a $\mathcal{P}$-chain permutational poset, given a subset of permutations $\mathcal{P}$ of the symmetric group $S_{n}$. In this work, we use the same idea to study subsets of words of length $n$, that are…
We introduce a class of posets, which includes both ribbon posets (skew shapes) and $d$-complete posets, such that their number of linear extensions is given by a determinant of a matrix whose entries are products of hook lengths. We also…