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Recognizing spans of biomedical concepts and their types (e.g., drug or gene) in free text, often called biomedical named entity recognition (NER), is a basic component of information extraction (IE) pipelines. Without a strong NER…

Computation and Language · Computer Science 2025-04-02 Motasem S Obeidat , Md Sultan Al Nahian , Ramakanth Kavuluru

Large Language Models (LLMs) have fundamentally transformed approaches to Natural Language Processing (NLP) tasks across diverse domains. In healthcare, accurate and cost-efficient text classification is crucial, whether for clinical notes…

Computation and Language · Computer Science 2026-02-16 Hajar Sakai , Sarah S. Lam

Generative large language models (LLMs) can be a powerful tool for augmenting text annotation procedures, but their performance varies across annotation tasks due to prompt quality, text data idiosyncrasies, and conceptual difficulty.…

Computation and Language · Computer Science 2023-06-02 Nicholas Pangakis , Samuel Wolken , Neil Fasching

Large Language Models (LLMs) have the potential to semi-automate some process mining (PM) analyses. While commercial models are already adequate for many analytics tasks, the competitive level of open-source LLMs in PM tasks is unknown. In…

Computation and Language · Computer Science 2024-07-19 Alessandro Berti , Humam Kourani , Wil M. P. van der Aalst

The rapid adoption of LLMs has overshadowed the potential advantages of traditional BERT-like models in text classification. This study challenges the prevailing "LLM-centric" trend by systematically comparing three category methods, i.e.,…

Computation and Language · Computer Science 2025-05-27 Junyan Zhang , Yiming Huang , Shuliang Liu , Yubo Gao , Xuming Hu

Large language models (LLMs) are the foundation of many AI applications today. However, despite their remarkable proficiency in generating coherent text, questions linger regarding their ability to perform fine-grained linguistic annotation…

Computation and Language · Computer Science 2025-03-26 Jiali Cheng , Hadi Amiri

Large language models offer a scalable alternative to human coding for data annotation tasks, enabling the scale-up of research across data-intensive domains. While LLMs are already achieving near-human accuracy on objective annotation…

Computation and Language · Computer Science 2026-01-21 Zhen Xu , Vedant Khatri , Yijun Dai , Xiner Liu , Siyan Li , Xuanming Zhang , Renzhe Yu

Collecting labeled datasets in finance is challenging due to scarcity of domain experts and higher cost of employing them. While Large Language Models (LLMs) have demonstrated remarkable performance in data annotation tasks on general…

Computation and Language · Computer Science 2024-03-28 Toyin Aguda , Suchetha Siddagangappa , Elena Kochkina , Simerjot Kaur , Dongsheng Wang , Charese Smiley , Sameena Shah

Large language models (LLMs) know little about enterprise database tables in the private data ecosystem, which substantially differ from web text in structure and content. As LLMs' performance is tied to their training data, a crucial…

Databases · Computer Science 2024-07-31 Çağatay Demiralp , Fabian Wenz , Peter Baile Chen , Moe Kayali , Nesime Tatbul , Michael Stonebraker

Low-resource languages face significant barriers in AI development due to limited linguistic resources and expertise for data labeling, rendering them rare and costly. The scarcity of data and the absence of preexisting tools exacerbate…

Computation and Language · Computer Science 2024-06-25 Nataliia Kholodna , Sahib Julka , Mohammad Khodadadi , Muhammed Nurullah Gumus , Michael Granitzer

Engineering LLMs to accelerate life sciences research requires a robust alignment with biomedical knowledge. We observe that biomedical text exhibits a fundamentally different uncertainty structure from general text: dense low-confidence…

Although the annotation paradigm based on Large Language Models (LLMs) has made significant breakthroughs in recent years, its actual deployment still has two core bottlenecks: first, the cost of calling commercial APIs in large-scale…

Computation and Language · Computer Science 2025-06-23 Yao Lu , Zhaiyuan Ji , Jiawei Du , Yu Shanqing , Qi Xuan , Tianyi Zhou

Linguistic annotation of transcribed speech is essential for research in language acquisition, language disorders, and sociolinguistics, yet remains labor-intensive and time-consuming. While Large Language Models (LLMs) have shown promise…

Computation and Language · Computer Science 2026-05-19 Qingwen Zhao , Hongao Zhu , Yunqi He , Rui Wang , Aijun Huang , Hai Hu

Large language models (LLMs) have the potential to revolutionize computational social science, particularly in automated textual analysis. In this paper, we conduct a systematic evaluation of the promises and risks associated with using…

Computation and Language · Computer Science 2025-07-29 Hao Lin , Yongjun Zhang

The complexity and heterogeneity of data in many real-world applications pose significant challenges for traditional machine learning and signal processing techniques. For instance, in medicine, effective analysis of diverse physiological…

Machine Learning · Computer Science 2024-08-16 Nimeesha Chan , Felix Parker , William Bennett , Tianyi Wu , Mung Yao Jia , James Fackler , Kimia Ghobadi

Large Language Models (LLMs) are often proposed as tools to streamline clinical documentation, a task viewed as both high-volume and low-risk. However, even seemingly straightforward applications of LLMs raise complex sociotechnical…

Human-Computer Interaction · Computer Science 2025-09-05 Kristina L. Kupferschmidt , Kieran O'Doherty , Joshua A. Skorburg

Multi-task learning (MTL) has achieved remarkable success in natural language processing applications. In this work, we study a multi-task learning model with multiple decoders on varieties of biomedical and clinical natural language…

Computation and Language · Computer Science 2020-05-07 Yifan Peng , Qingyu Chen , Zhiyong Lu

As Large Language Model (LLM) capabilities advance, the demand for high-quality annotation of exponentially increasing text corpora has outpaced human capacity, leading to the widespread adoption of LLMs in automatic evaluation and…

Computation and Language · Computer Science 2026-04-02 Jiayu Wang , Junyoung Lee

High annotation costs from hiring or crowdsourcing complicate the creation of large, high-quality datasets needed for training reliable text classifiers. Recent research suggests using Large Language Models (LLMs) to automate the annotation…

Computation and Language · Computer Science 2025-01-27 Tomas Horych , Christoph Mandl , Terry Ruas , Andre Greiner-Petter , Bela Gipp , Akiko Aizawa , Timo Spinde

NLP benchmarks rely on standardized datasets for training and evaluating models and are crucial for advancing the field. Traditionally, expert annotations ensure high-quality labels; however, the cost of expert annotation does not scale…

Computation and Language · Computer Science 2025-09-15 Omer Nahum , Nitay Calderon , Orgad Keller , Idan Szpektor , Roi Reichart